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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: UMOD

Summary

GeneID

7369

Symbol

UMOD

Synonyms

Description

uromodulin

Locus tag

Gene type

protein-coding

Map location

16p12.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.01775

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

TFPI

0.89

0.66

CRISPLD1

0.86

0.63

LRRC17

0.84

0.69

PTN

0.81

0.72

FBXL13

0.81

0.53

GDPD2

0.79

0.65

C21orf62

0.79

0.57

HAPLN3

0.78

0.62

TSPAN6

0.77

0.55

ZNF474

0.77

0.46

Top 10 negatively co-expressed genes

CA11

-0.31

-0.32

CA4

-0.30

-0.28

ASPHD1

-0.29

-0.25

ITPKA

-0.28

-0.29

SLC26A4

-0.28

-0.32

ABTB1

-0.28

-0.27

CCNI2

-0.28

-0.21

SPDEF

-0.27

-0.30

HLA-F

-0.27

-0.20

SFTPC

-0.27

-0.34

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005509

calcium ion binding

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006968

cellular defense response

TAS

2409603

GO:0008285

negative regulation of cell proliferation

TAS

2409603

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005576

extracellular region

IEA

GO:0005886

plasma membrane

IEA

GO:0031225

anchored to membrane

IEA

GO:0019898

extrinsic to membrane

TAS

7873609

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
LTA	LT \| TNFB \| TNFSF1	lymphotoxin alpha (TNF superfamily, member 1)	-	HPRD,BioGRID	8323280
MMP8	CLG1 \| HNC \| PMNL-CL	matrix metallopeptidase 8 (neutrophil collagenase)	-	HPRD	8397318

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-214	44	50	m8	hsa-miR-214^brain	ACAGCAGGCACAGACAGGCAG

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.