Gene Page

Gene Page: ZMYM2

Summary

GeneID

7750

Symbol

ZMYM2

Synonyms

FIM|MYM|RAMP|SCLL|ZNF198

Description

zinc finger, MYM-type 2

See related

HGNC:12989|MIM:602221|HPRD:03745|

Locus tag

Gene type

protein-coding

Map location

13q11-q12

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Literature

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]

Click to show detail

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005515

protein binding

TAS

9425908

GO:0008270

zinc ion binding

IEA

GO:0008270

zinc ion binding

NAS

9576949

GO:0046872

metal ion binding

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006355

regulation of transcription, DNA-dependent

IEA

GO:0006350

transcription

IEA

GO:0008150

biological_process

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005575

cellular_component

GO:0005634

nucleus

IEA

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
AOF2	BHC110 \| KDM1 \| KIAA0601 \| LSD1	amine oxidase (flavin containing) domain 2	Affinity Capture-MS	BioGRID	12493763
CEBPE	C/EBP-epsilon \| CRP1	CCAAT/enhancer binding protein (C/EBP), epsilon	C/EBP-epsilon interacts with ZNF198.	BIND	15588942
HDAC2	RPD3 \| YAF1	histone deacetylase 2	Affinity Capture-MS	BioGRID	12493763
SMAD3	DKFZp586N0721 \| DKFZp686J10186 \| HSPC193 \| HsT17436 \| JV15-2 \| MADH3 \| MGC60396	SMAD family member 3	Smad3 interacts with ZNF198. This interaction was modeled on a demonstrated interaction between human Smad3 and mouse ZNF198.	BIND	14651998

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-103/107	48	54	m8	hsa-miR-103^brain	AGCAGCAUUGUACAGGGCUAUGA
miR-103/107	48	54	m8	hsa-miR-107^brain	AGCAGCAUUGUACAGGGCUAUCA
miR-137	16	22	m8	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-15/16/195/424/497	49	56	1A,m8	hsa-miR-15a^brain	UAGCAGCACAUAAUGGUUUGUG
				hsa-miR-16^brain	UAGCAGCACGUAAAUAUUGGCG
				hsa-miR-15b^brain	UAGCAGCACAUCAUGGUUUACA
				hsa-miR-195^SZ	UAGCAGCACAGAAAUAUUGGC
				hsa-miR-424	CAGCAGCAAUUCAUGUUUUGAA
				hsa-miR-497	CAGCAGCACACUGUGGUUUGU
miR-155	34	40	m8	hsa-miR-155	UUAAUGCUAAUCGUGAUAGGGG
miR-183	284	290	m8	hsa-miR-183	UAUGGCACUGGUAGAAUUCACUG
miR-186	211	217	m8	hsa-miR-186	CAAAGAAUUCUCCUUUUGGGCUU
miR-221/222	107	113	1A	hsa-miR-221^brain	AGCUACAUUGUCUGCUGGGUUUC
miR-221/222	107	113	1A	hsa-miR-222^brain	AGCUACAUCUGGCUACUGGGUCUC
miR-23	615	622	1A,m8	hsa-miR-23a^brain	AUCACAUUGCCAGGGAUUUCC
miR-23	615	622	1A,m8	hsa-miR-23b^brain	AUCACAUUGCCAGGGAUUACC
miR-323	614	621	1A,m8	hsa-miR-323^brain	GCACAUUACACGGUCGACCUCU
miR-376c	171	178	1A,m8	hsa-miR-376c	AACAUAGAGGAAAUUCCACG
miR-496	136	143	1A,m8	hsa-miR-496	AUUACAUGGCCAAUCUC
miR-503	50	56	1A	hsa-miR-503	UAGCAGCGGGAACAGUUCUGCAG
miR-539	676	682	1A	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.