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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: TTPAL

Summary

GeneID

79183

Symbol

TTPAL

Synonyms

C20orf121|DKFZp686E0870|MGC2470

Description

tocopherol (alpha) transfer protein-like

Locus tag

RP1-179M20.4

Gene type

protein-coding

Map location

20q13.12

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Network

Shortest path distance of core genes in the Human protein-protein interaction network

Contribution to shortest path in PPI network: 0.1354

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

IL17RB

0.83

0.68

AGXT2L1

0.83

0.76

BBOX1

0.81

0.85

HRSP12

0.81

0.79

TRAF3IP2

0.79

0.73

ALDH1L1

0.79

PHF11

0.78

0.69

PON2

0.78

0.82

MGST1

0.77

TMBIM1

0.75

0.71

Top 10 negatively co-expressed genes

RTF1

-0.52

-0.60

MYT1L

-0.50

-0.59

TCOF1

-0.50

-0.55

PDCD11

-0.50

-0.59

NOVA2

-0.49

-0.58

BRPF1

-0.49

-0.59

RNF165

-0.49

-0.60

HECW1

-0.49

-0.59

SAFB

-0.49

-0.57

LSM14B

-0.49

-0.57

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005215

transporter activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006810

transport

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005622

intracellular

IEA

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-141/200a	4940	4946	m8	hsa-miR-141	UAACACUGUCUGGUAAAGAUGG
miR-141/200a	4940	4946	m8	hsa-miR-200a	UAACACUGUCUGGUAACGAUGU
miR-30-3p	4886	4892	m8	hsa-miR-30a-3p	CUUUCAGUCGGAUGUUUGCAGC
miR-30-3p	4886	4892	m8	hsa-miR-30e-3p	CUUUCAGUCGGAUGUUUACAGC
miR-330	4902	4908	1A	hsa-miR-330^brain	GCAAAGCACACGGCCUGCAGAGA

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.