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|
| GeneID |
7919
|
| Symbol |
BAT1
|
| Synonyms |
D6S81E|DDX39B|UAP56
|
| Description |
HLA-B associated transcript 1 |
| See related |
HGNC:13917|MIM:142560|Ensembl:ENSG00000198563|HPRD:00805| |
| Locus tag |
DAAP-97M17.4 |
| Gene type |
protein-coding |
| Map location |
6p21.3 |
|
| |
|
|
| Gene set name |
Method of gene set |
Evidence |
Info |
| GSMA_I | genome scan meta-analysis | Psr: 0.033 | | | Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia] | Click to show detail | | Network | Shortest path distance of core genes in the Human protein-protein interaction network | Contribution to shortest path in PPI network: 0.112 | |
|
| |
| General Gene Expression (microarray) ? |
|
 |
| |
| Gene Expression in Brain Regions (new) |
|
| |
| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| EMD | 0.90 | 0.91 | | |
| C20orf4 | 0.90 | 0.92 | | |
| ACTR1A | 0.90 | 0.90 | | |
| CFL1 | 0.90 | 0.91 | | |
| TRAPPC4 | 0.90 | 0.92 | | |
| FTSJ1 | 0.89 | 0.90 | | |
| PPP2R1A | 0.89 | 0.89 | | |
| MRPS2 | 0.89 | 0.90 | | |
| SLC25A17 | 0.89 | 0.91 | | |
| MLLT11 | 0.89 | 0.89 | | |
Top 10 negatively co-expressed genes | | AF347015.27 | -0.79 | -0.85 | | |
| MT-CO2 | -0.78 | -0.83 | | |
| AF347015.8 | -0.78 | -0.85 | | |
| AF347015.33 | -0.78 | -0.84 | | |
| MT-CYB | -0.76 | -0.82 | | |
| AF347015.31 | -0.76 | -0.81 | | |
| AF347015.2 | -0.75 | -0.85 | | |
| AF347015.15 | -0.75 | -0.82 | | |
| AF347015.26 | -0.73 | -0.83 | | |
| AF347015.21 | -0.72 | -0.84 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0000166 | nucleotide binding | IEA | | - |
| GO:0003676 | nucleic acid binding | IEA | | - |
| GO:0003723 | RNA binding | IEA | | - |
| GO:0004004 | ATP-dependent RNA helicase activity | TAS | | 7601445 |
| GO:0005524 | ATP binding | IEA | | - |
| GO:0004386 | helicase activity | IEA | | - |
| GO:0016787 | hydrolase activity | IEA | | - |
| GO:0042802 | identical protein binding | IPI | | 14667819 |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0000398 | nuclear mRNA splicing, via spliceosome | IGI | | 15047853 |
| GO:0006406 | mRNA export from nucleus | IGI | | 15047853 |
| GO:0008380 | RNA splicing | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005634 | nucleus | TAS | | 7601445 |
| GO:0005681 | spliceosome | IEA | | - |
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