Gene Page: C6orf211

Summary
GeneID  79624
Symbol  C6orf211
Synonyms  DKFZp566I174|FLJ12910
Description  chromosome 6 open reading frame 211
See related  HGNC:17872|Ensembl:ENSG00000146476|HPRD:09854|
Locus tag  -
Gene type  protein-coding
Map location  6q25.1
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
SYNJ10.970.95
GLS0.960.93
ARFGEF20.960.92
MAP2K40.950.93
PREPL0.950.92
FAM179B0.950.90
FAM73A0.940.88
DPP80.940.90
SYT10.940.91
CHM0.940.91
Top 10 negatively co-expressed genes
EFEMP2-0.47-0.53
BCL7C-0.47-0.53
AC006276.2-0.45-0.45
RAB34-0.44-0.53
NME4-0.43-0.54
C1orf61-0.42-0.60
TBC1D10A-0.41-0.31
RFXANK-0.41-0.45
RPLP1-0.40-0.42
RPL35-0.40-0.45
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005515protein bindingIPI17353931 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusIDA18029348 
GO:0005737cytoplasmIDA18029348 
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
SAP182HOR0202 | MGC27131 | SAP18pSin3A-associated protein, 18kDaAffinity Capture-MSBioGRID17353931 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
let-7/985235291Ahsa-let-7abrainUGAGGUAGUAGGUUGUAUAGUU
hsa-let-7bbrainUGAGGUAGUAGGUUGUGUGGUU
hsa-let-7cbrainUGAGGUAGUAGGUUGUAUGGUU
hsa-let-7dbrainAGAGGUAGUAGGUUGCAUAGU
hsa-let-7ebrainUGAGGUAGGAGGUUGUAUAGU
hsa-let-7fbrainUGAGGUAGUAGAUUGUAUAGUU
hsa-miR-98brainUGAGGUAGUAAGUUGUAUUGUU
hsa-let-7gSZUGAGGUAGUAGUUUGUACAGU
hsa-let-7ibrainUGAGGUAGUAGUUUGUGCUGU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


Copyright © Bioinformatics and Systems Medicine Laboratory All Rights Reserved since 2009.