Gene Page: FLJ12529

Summary
GeneID  79869
Symbol  FLJ12529
Synonyms  FLJ39024|MGC9315
Description  pre-mRNA cleavage factor I, 59 kDa subunit
See related  Ensembl:ENSG00000149532|HPRD:16906|
Locus tag  -
Gene type  protein-coding
Map location  11q12.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
NetworkShortest path distance of core genes in the Human protein-protein interaction networkContribution to shortest path in PPI network: 0.009 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
Top 10 negatively co-expressed genes
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0000166nucleotide bindingIEA-
GO:0003723RNA bindingIEA-
GO:0005515protein bindingIPI16713569 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0000398nuclear mRNA splicing, via spliceosomeEXP12226669 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusIEA-
 
Protein-protein InteractionsShown by network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
DVL2-dishevelled, dsh homolog 2 (Drosophila)Two-hybridBioGRID16189514 
EWSR1EWSEwing sarcoma breakpoint region 1Two-hybridBioGRID16189514 
GCC1FLJ22035 | GCC1P | GCC88 | MGC20706GRIP and coiled-coil domain containing 1Two-hybridBioGRID16189514 
NCK2GRB4 | NCKbetaNCK adaptor protein 2Two-hybridBioGRID16189514 
NUDT21CFIM25 | CPSF5 | DKFZp686H1588nudix (nucleoside diphosphate linked moiety X)-type motif 21Two-hybridBioGRID16189514 
PRMT2HRMT1L1 | MGC111373protein arginine methyltransferase 2Two-hybridBioGRID16189514 
SORBS3SCAM-1 | SCAM1 | SH3D4 | VINEXINsorbin and SH3 domain containing 3Two-hybridBioGRID16189514 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-1/20615751581m8hsa-miR-1UGGAAUGUAAAGAAGUAUGUA
hsa-miR-206SZUGGAAUGUAAGGAAGUGUGUGG
hsa-miR-613AGGAAUGUUCCUUCUUUGCC
miR-15/16/195/424/497758764m8hsa-miR-15abrainUAGCAGCACAUAAUGGUUUGUG
hsa-miR-16brainUAGCAGCACGUAAAUAUUGGCG
hsa-miR-15bbrainUAGCAGCACAUCAUGGUUUACA
hsa-miR-195SZUAGCAGCACAGAAAUAUUGGC
hsa-miR-424CAGCAGCAAUUCAUGUUUUGAA
hsa-miR-497CAGCAGCACACUGUGGUUUGU
miR-1824214271Ahsa-miR-182UUUGGCAAUGGUAGAACUCACA
miR-3284664721Ahsa-miR-328brainCUGGCCCUCUCUGCCCUUCCGU
miR-330294300m8hsa-miR-330brainGCAAAGCACACGGCCUGCAGAGA
miR-36119371943m8hsa-miR-361brainUUAUCAGAAUCUCCAGGGGUAC
miR-45515721578m8hsa-miR-455UAUGUGCCUUUGGACUACAUCG
miR-964204271A,m8hsa-miR-96brainUUUGGCACUAGCACAUUUUUGC
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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