Gene Page

Gene Page: NAT13

Summary

GeneID

80218

Symbol

NAT13

Synonyms

FLJ13194|MAK3|NAT5|SAN|hNAT5|hSAN

Description

N-acetyltransferase 13 (GCN5-related)

Locus tag

Gene type

protein-coding

Map location

3q13.2

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.04359

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.04047

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005515

protein binding

IPI

16507339

GO:0016740

transferase activity

IEA

GO:0008415

acyltransferase activity

IEA

GO:0008080

N-acetyltransferase activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006474

N-terminal protein amino acid acetylation

TAS

16507339

GO:0008152

metabolic process

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005737

cytoplasm

IDA

16507339

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-128	1234	1241	1A,m8	hsa-miR-128a	UCACAGUGAACCGGUCUCUUUU
miR-128	1234	1241	1A,m8	hsa-miR-128b	UCACAGUGAACCGGUCUCUUUC
miR-130/301	22	28	m8	hsa-miR-130a^brain	CAGUGCAAUGUUAAAAGGGCAU
				hsa-miR-301	CAGUGCAAUAGUAUUGUCAAAGC
				hsa-miR-130b^brain	CAGUGCAAUGAUGAAAGGGCAU
				hsa-miR-454-3p	UAGUGCAAUAUUGCUUAUAGGGUUU
miR-145	2361	2368	1A,m8	hsa-miR-145	GUCCAGUUUUCCCAGGAAUCCCUU
miR-153	2490	2497	1A,m8	hsa-miR-153	UUGCAUAGUCACAAAAGUGA
miR-18	1776	1782	m8	hsa-miR-18a	UAAGGUGCAUCUAGUGCAGAUA
miR-18	1776	1782	m8	hsa-miR-18b	UAAGGUGCAUCUAGUGCAGUUA
miR-181	1985	1992	1A,m8	hsa-miR-181a^brain	AACAUUCAACGCUGUCGGUGAGU
				hsa-miR-181b^SZ	AACAUUCAUUGCUGUCGGUGGG
				hsa-miR-181c^brain	AACAUUCAACCUGUCGGUGAGU
				hsa-miR-181d^brain	AACAUUCAUUGUUGUCGGUGGGUU
miR-194	2730	2737	1A,m8	hsa-miR-194	UGUAACAGCAACUCCAUGUGGA
miR-203.1	1955	1961	1A	hsa-miR-203	UGAAAUGUUUAGGACCACUAG
miR-21	1794	1800	m8	hsa-miR-21^brain	UAGCUUAUCAGACUGAUGUUGA
miR-21	1794	1800	m8	hsa-miR-590	GAGCUUAUUCAUAAAAGUGCAG
miR-214	693	699	m8	hsa-miR-214^brain	ACAGCAGGCACAGACAGGCAG
miR-223	786	792	m8	hsa-miR-223	UGUCAGUUUGUCAAAUACCCC
miR-23	1576	1583	1A,m8	hsa-miR-23a^brain	AUCACAUUGCCAGGGAUUUCC
miR-23	1576	1583	1A,m8	hsa-miR-23b^brain	AUCACAUUGCCAGGGAUUACC
miR-25/32/92/363/367	2493	2499	1A	hsa-miR-25^brain	CAUUGCACUUGUCUCGGUCUGA
				hsa-miR-32	UAUUGCACAUUACUAAGUUGC
				hsa-miR-92	UAUUGCACUUGUCCCGGCCUG
				hsa-miR-367	AAUUGCACUUUAGCAAUGGUGA
				hsa-miR-92b^SZ	UAUUGCACUCGUCCCGGCCUC
miR-27	1235	1241	m8	hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
miR-27	1235	1241	m8	hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
miR-323	1576	1582	1A	hsa-miR-323^brain	GCACAUUACACGGUCGACCUCU
miR-335	1808	1814	m8	hsa-miR-335^brain	UCAAGAGCAAUAACGAAAAAUGU
miR-34/449	1934	1940	m8	hsa-miR-34a^brain	UGGCAGUGUCUUAGCUGGUUGUU
				hsa-miR-34c	AGGCAGUGUAGUUAGCUGAUUGC
				hsa-miR-449	UGGCAGUGUAUUGUUAGCUGGU
				hsa-miR-449b	AGGCAGUGUAUUGUUAGCUGGC
miR-34b	1935	1941	m8	hsa-miR-34b	UAGGCAGUGUCAUUAGCUGAUUG
miR-376	1982	1988	1A	hsa-miR-376a	AUCAUAGAGGAAAAUCCACGU
miR-376	1982	1988	1A	hsa-miR-376b	AUCAUAGAGGAAAAUCCAUGUU
miR-448	2491	2497	1A	hsa-miR-448	UUGCAUAUGUAGGAUGUCCCAU
miR-96	1617	1623	m8	hsa-miR-96^brain	UUUGGCACUAGCACAUUUUUGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.