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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: CAB39L

Summary

GeneID

81617

Symbol

CAB39L

Synonyms

FLJ12577|MO25-BETA|MO2L|RP11-103J18.3|bA103J18.3

Description

calcium binding protein 39-like

Locus tag

Gene type

protein-coding

Map location

13q14.2-q14.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Expression

P value: 2.161

Literature

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]

Click to show detail

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

ALK

0.77

0.80

LAMB3

0.74

0.78

GJD2

0.74

0.77

CDH8

0.73

0.74

C4orf44

0.73

0.72

KIF17

0.73

0.79

PWWP2B

0.73

0.74

CACNA2D3

0.72

0.71

CYB561

0.71

0.80

EPHA10

0.71

0.73

Top 10 negatively co-expressed genes

KCNMB3

-0.31

-0.37

NEUROD6

-0.31

-0.13

SLA

-0.30

0.02

NHSL1

-0.30

-0.17

SCUBE1

-0.30

-0.17

PCSK9

-0.29

-0.18

SATB2

-0.29

-0.04

DACT1

-0.29

0.02

KLHL1

-0.29

0.00

ZEB2

-0.29

-0.13

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005488

binding

IEA

GO:0005515

protein binding

IPI

17353931

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
BCKDK	-	branched chain ketoacid dehydrogenase kinase	Affinity Capture-MS	BioGRID	17353931

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-342	2076	2082	1A	hsa-miR-342^brain	UCUCACACAGAAAUCGCACCCGUC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.