Gene Page

Gene Page: SBF2

Summary

GeneID

81846

Symbol

SBF2

Synonyms

Description

SET binding factor 2

Locus tag

Gene type

protein-coding

Map location

11p15.4

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GO_Annotation

Mapping neuro-related keywords to Gene Ontology annotations

Hits with neuro-related keywords: 1

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005515

protein binding

IPI

15998640

GO:0016791

phosphatase activity

IEA

GO:0019902

phosphatase binding

IEA

GO:0042803

protein homodimerization activity

IEA

GO:0019208

phosphatase regulator activity

IEA

GO:0035091

phosphoinositide binding

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0042552

myelination

NAS

neuron, axon, Brain, oligodendrocyte (GO term level: 13)

15998640

GO:0016311

dephosphorylation

IEA

GO:0051262

protein tetramerization

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005737

cytoplasm

IEA

GO:0005774

vacuolar membrane

IEA

GO:0016020

membrane

IDA

15998640

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-145	1548	1554	m8	hsa-miR-145	GUCCAGUUUUCCCAGGAAUCCCUU
miR-148/152	811	818	1A,m8	hsa-miR-148a	UCAGUGCACUACAGAACUUUGU
				hsa-miR-152^brain	UCAGUGCAUGACAGAACUUGGG
				hsa-miR-148b	UCAGUGCAUCACAGAACUUUGU
miR-182	502	508	1A	hsa-miR-182	UUUGGCAAUGGUAGAACUCACA
miR-19	1435	1442	1A,m8	hsa-miR-19a	UGUGCAAAUCUAUGCAAAACUGA
miR-19	1435	1442	1A,m8	hsa-miR-19b	UGUGCAAAUCCAUGCAAAACUGA
miR-205	1380	1387	1A,m8	hsa-miR-205	UCCUUCAUUCCACCGGAGUCUG
miR-29	496	502	m8	hsa-miR-29a^SZ	UAGCACCAUCUGAAAUCGGUU
				hsa-miR-29b^SZ	UAGCACCAUUUGAAAUCAGUGUU
				hsa-miR-29c^SZ	UAGCACCAUUUGAAAUCGGU
miR-381	1459	1465	1A	hsa-miR-381	UAUACAAGGGCAAGCUCUCUGU
miR-543	1118	1124	1A	hsa-miR-543	AAACAUUCGCGGUGCACUUCU
miR-96	502	508	1A	hsa-miR-96^brain	UUUGGCACUAGCACAUUUUUGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.