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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: SLC25A18

Summary

GeneID

83733

Symbol

SLC25A18

Synonyms

GC2

Description

solute carrier family 25 (mitochondrial carrier), member 18

Locus tag

Gene type

protein-coding

Map location

22q11.2

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.031

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

SELPLG

0.73

0.77

ACY3

0.72

0.76

PLD4

0.72

0.76

CD74

0.72

0.69

HLA-DMB

0.71

HLA-DPA1

0.71

0.65

0.70

0.74

APBB1IP

0.69

0.71

BLNK

0.69

0.67

DEF6

0.68

0.65

Top 10 negatively co-expressed genes

AC004017.1

-0.38

-0.31

KIAA1949

-0.38

-0.34

ZNF551

-0.37

-0.28

ZNF300

-0.37

-0.29

AF186192.1

-0.36

ZNF193

-0.36

-0.33

TIGD1

-0.36

-0.32

ZNF124

-0.36

-0.28

TUBB2B

-0.36

-0.42

AIM2

-0.36

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005488

binding

IEA

GO:0015293

symporter activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006810

transport

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005739

mitochondrion

IEA

GO:0005743

mitochondrial inner membrane

IEA

GO:0016020

membrane

IEA

GO:0016021

integral to membrane

IEA

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
let-7/98	120	127	1A,m8	hsa-let-7a^brain	UGAGGUAGUAGGUUGUAUAGUU
				hsa-let-7b^brain	UGAGGUAGUAGGUUGUGUGGUU
				hsa-let-7c^brain	UGAGGUAGUAGGUUGUAUGGUU
				hsa-let-7d^brain	AGAGGUAGUAGGUUGCAUAGU
				hsa-let-7e^brain	UGAGGUAGGAGGUUGUAUAGU
				hsa-let-7f^brain	UGAGGUAGUAGAUUGUAUAGUU
				hsa-miR-98^brain	UGAGGUAGUAAGUUGUAUUGUU
				hsa-let-7g^SZ	UGAGGUAGUAGUUUGUACAGU
				hsa-let-7i^brain	UGAGGUAGUAGUUUGUGCUGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.