Gene Page: ARL6

Summary
GeneID  84100
Symbol  ARL6
Synonyms  BBS3|MGC32934
Description  ADP-ribosylation factor-like 6
See related  HGNC:13210|MIM:608845|Ensembl:ENSG00000113966|HPRD:10588|
Locus tag  -
Gene type  protein-coding
Map location  3q11.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.04047 
GSMA_IIEgenome scan meta-analysis (European-ancestry samples)Psr: 0.04359 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
Top 10 negatively co-expressed genes
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0000166nucleotide bindingIEA-
GO:0005515protein bindingISS-
GO:0005525GTP bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007368determination of left/right symmetryISS-
GO:0007264small GTPase mediated signal transductionIEA-
GO:0042384cilium biogenesisISS-
GO:0032402melanosome transportISS-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005622intracellularIEA-
GO:0005737cytoplasmISS-
GO:0016020membraneISS-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
ARL6IP1AIP1 | ARL6IP | ARMER | KIAA0069ADP-ribosylation factor-like 6 interacting protein 1-HPRD,BioGRID10508919 
ARL6IP4MGC814 | SR-25 | SRp25ADP-ribosylation-like factor 6 interacting protein 4-HPRD,BioGRID10508919 
ARL6IP5DERP11 | GTRAP3-18 | HSPC127 | JWA | PRAF3 | addicsin | hp22 | jmxADP-ribosylation-like factor 6 interacting protein 5-HPRD,BioGRID10508919 
ARL6IP6MGC33864 | PFAAP1ADP-ribosylation-like factor 6 interacting protein 6-HPRD,BioGRID10508919 
ATL2ARL3IP2 | ARL6IP2 | FLJ23293 | atlastin2atlastin GTPase 2-HPRD,BioGRID10508919 
SEC61B-Sec61 beta subunit-HPRD,BioGRID10508919 
 
Pathway annotation
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-135280286m8hsa-miR-135aUAUGGCUUUUUAUUCCUAUGUGA
hsa-miR-135bUAUGGCUUUUCAUUCCUAUGUG
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


Copyright © Bioinformatics and Systems Medicine Laboratory All Rights Reserved since 2009.