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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: RGPD5

Summary

GeneID

84220

Symbol

RGPD5

Synonyms

BS-63|DKFZp686I1842|RANBP2L1|RGP5

Description

RANBP2-like and GRIP domain containing 5

Locus tag

Gene type

protein-coding

Map location

2q13

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.0004

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.00755

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005488

binding

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0046907

intracellular transport

IEA

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
MLLT10	AF10 \| DKFZp686E10210 \| MGC75086	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	-	HPRD	11774384
RAN	ARA24 \| Gsp1 \| TC4	RAN, member RAS oncogene family	-	HPRD	11774384
TNPO1	IPO2 \| KPNB2 \| MIP \| MIP1 \| TRN	transportin 1	-	HPRD,BioGRID	11774384 \|12905863

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-128	1534	1540	1A	hsa-miR-128a	UCACAGUGAACCGGUCUCUUUU
miR-128	1534	1540	1A	hsa-miR-128b	UCACAGUGAACCGGUCUCUUUC
miR-135	933	939	m8	hsa-miR-135a	UAUGGCUUUUUAUUCCUAUGUGA
miR-135	933	939	m8	hsa-miR-135b	UAUGGCUUUUCAUUCCUAUGUG
miR-214	1386	1392	1A	hsa-miR-214^brain	ACAGCAGGCACAGACAGGCAG
miR-27	1534	1541	1A,m8	hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
miR-27	1534	1541	1A,m8	hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
miR-29	1031	1037	m8	hsa-miR-29a^SZ	UAGCACCAUCUGAAAUCGGUU
				hsa-miR-29b^SZ	UAGCACCAUUUGAAAUCAGUGUU
				hsa-miR-29c^SZ	UAGCACCAUUUGAAAUCGGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.