Gene Page: IQCG

Summary ?
GeneID84223
SymbolIQCG
SynonymsCFAP122|DRC9
DescriptionIQ motif containing G
ReferenceMIM:612477|HGNC:HGNC:25251|Ensembl:ENSG00000114473|HPRD:13746|Vega:OTTHUMG00000155408
Gene typeprotein-coding
Map location3q29
Pascal p-value0.09
Sherlock p-value0.01
Fetal beta0.053
eGeneCerebellar Hemisphere
Cerebellum
Cortex
Frontal Cortex BA9
Myers' cis & trans
Meta

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:PGCnpGenome-wide Association StudyGWAS

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP IDChromosomePositioneGeneGene Entrez IDpvalueqvalueTSS distanceeQTL type
rs6703905chr189656748IQCG842230.19trans
rs6659821chr1110339827IQCG842230trans
rs1814902chr343251753IQCG842230.09trans
rs9681394chr343256230IQCG842230.02trans
rs4683367chr343257826IQCG842230.09trans
rs7621511chr343279877IQCG842230.09trans
rs6799944chr3122905753IQCG842230.04trans
rs1981925chr434348578IQCG842230.04trans
rs2291715chr475485871IQCG842230.19trans
rs4544747chr4179527501IQCG842230.14trans
rs6862696chr566724676IQCG842230.16trans
rs2268637chr639050917IQCG842230.1trans
rs17160028chr731292738IQCG842230.19trans
rs10486710chr741315585IQCG842230.11trans
rs38847chr7116325325IQCG842230.1trans
rs4923483chr1127835749IQCG842230.07trans
rs1491856chr1127845988IQCG842230.05trans
rs4923492chr1127859181IQCG842230.12trans
rs1352864chr1127866782IQCG842230.02trans
rs2638120chr1127887392IQCG842230.02trans
rs2638121chr1127887421IQCG842230.01trans
rs7117381chr1127909690IQCG842230.05trans
rs16954076chr1398054591IQCG842230.12trans
rs236517chr1768275174IQCG842230.18trans
rs16953782chr188564832IQCG842230.09trans
rs16962554chr1929590544IQCG842230.01trans
rs7268640chr2047150267IQCG842230.08trans
rs8127083chr2131690320IQCG842230.09trans
rs7062071chrX17724830IQCG842230.06trans

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression during devlopment (BrainCloud)

Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
PARENT MTOR SIGNALING UP 567375All SZGR 2.0 genes in this pathway
BERTUCCI MEDULLARY VS DUCTAL BREAST CANCER UP 206111All SZGR 2.0 genes in this pathway
SENGUPTA NASOPHARYNGEAL CARCINOMA DN 349157All SZGR 2.0 genes in this pathway
DAVICIONI MOLECULAR ARMS VS ERMS UP 332228All SZGR 2.0 genes in this pathway
ZHOU INFLAMMATORY RESPONSE LIVE UP 485293All SZGR 2.0 genes in this pathway
GINESTIER BREAST CANCER ZNF217 AMPLIFIED DN 335193All SZGR 2.0 genes in this pathway
KIM WT1 TARGETS UP 214155All SZGR 2.0 genes in this pathway
DODD NASOPHARYNGEAL CARCINOMA UP 1821933All SZGR 2.0 genes in this pathway
GAUSSMANN MLL AF4 FUSION TARGETS A DN 9061All SZGR 2.0 genes in this pathway
NAKAMURA LUNG CANCER DIFFERENTIATION MARKERS 145All SZGR 2.0 genes in this pathway
EBAUER TARGETS OF PAX3 FOXO1 FUSION DN 4831All SZGR 2.0 genes in this pathway
CREIGHTON ENDOCRINE THERAPY RESISTANCE 2 473224All SZGR 2.0 genes in this pathway
SMID BREAST CANCER BASAL UP 648398All SZGR 2.0 genes in this pathway
MARTENS TRETINOIN RESPONSE DN 841431All SZGR 2.0 genes in this pathway
MADAN DPPA4 TARGETS 4626All SZGR 2.0 genes in this pathway
FORTSCHEGGER PHF8 TARGETS UP 279155All SZGR 2.0 genes in this pathway