Gene Page: LOC90379

Summary
GeneID  90379
Symbol  LOC90379
Synonyms  MGC99481
Description  hypothetical protein BC002926
See related  Ensembl:ENSG00000132017|
Locus tag  -
Gene type  protein-coding
Map location  19p13.12
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
ExpressionExpressionP value: 1.75 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
SOX170.800.77
LIMS20.750.72
GGT50.740.68
LSR0.730.74
NDUFA4L20.730.65
ID10.730.70
C20orf1600.730.73
TMEM2040.720.69
USHBP10.710.65
MFSD20.710.68
Top 10 negatively co-expressed genes
HUS1-0.47-0.47
GTDC1-0.47-0.45
NUDT3-0.46-0.45
GTPBP10-0.46-0.46
PITPNB-0.46-0.45
ZNF184-0.46-0.44
METTL6-0.46-0.42
ZC3H8-0.46-0.45
TTRAP-0.45-0.42
EIF5-0.45-0.42
Gene Ontology
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006511ubiquitin-dependent protein catabolic processIEA-
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
let-7/983137m8hsa-let-7abrainUGAGGUAGUAGGUUGUAUAGUU
hsa-let-7bbrainUGAGGUAGUAGGUUGUGUGGUU
hsa-let-7cbrainUGAGGUAGUAGGUUGUAUGGUU
hsa-let-7dbrainAGAGGUAGUAGGUUGCAUAGU
hsa-let-7ebrainUGAGGUAGGAGGUUGUAUAGU
hsa-let-7fbrainUGAGGUAGUAGAUUGUAUAGUU
hsa-miR-98brainUGAGGUAGUAAGUUGUAUUGUU
hsa-let-7gSZUGAGGUAGUAGUUUGUACAGU
hsa-let-7ibrainUGAGGUAGUAGUUUGUGCUGU
miR-1963036m8hsa-miR-196aUAGGUAGUUUCAUGUUGUUGG
hsa-miR-196bUAGGUAGUUUCCUGUUGUUGG
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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