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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: CCDC109A

Summary

GeneID

90550

Symbol

CCDC109A

Synonyms

C10orf42|FLJ46135

Description

coiled-coil domain containing 109A

Locus tag

Gene type

protein-coding

Map location

10q22.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Expression

P value: 2.26

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0016020

membrane

IEA

GO:0016021

integral to membrane

IEA

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-124/506	1448	1454	m8	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	1448	1454	m8	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-137	1827	1833	m8	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-138	345	352	1A,m8	hsa-miR-138^brain	AGCUGGUGUUGUGAAUC
miR-324-5p	1537	1543	1A	hsa-miR-324-5p	CGCAUCCCCUAGGGCAUUGGUGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.