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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: CLDN8

Summary

GeneID

9073

Symbol

CLDN8

Synonyms

Description

claudin 8

Locus tag

Gene type

protein-coding

Map location

21q22.11

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GO_Annotation

Mapping neuro-related keywords to Gene Ontology annotations

Hits with neuro-related keywords: 1

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

VPS4B

0.88

TM9SF3

0.87

ZDHHC17

0.87

CLCN3

0.87

0.86

BCL2L13

0.86

0.84

MYST2

0.86

FAM91A1

0.85

0.87

TMEM184C

0.85

0.83

LMBR1

0.85

0.86

KIAA0232

0.85

Top 10 negatively co-expressed genes

AF347015.21

-0.64

-0.52

MT-CO2

-0.61

-0.53

IL32

-0.59

-0.49

HIGD1B

-0.59

-0.53

FXYD1

-0.58

-0.51

AF347015.31

-0.58

-0.52

AC098691.2

-0.58

C1orf54

-0.58

-0.55

CSAG1

-0.58

-0.50

AF347015.8

-0.57

-0.51

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005198

structural molecule activity

IEA

GO:0042802

identical protein binding

ISS

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0016338

calcium-independent cell-cell adhesion

ISS

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005923

tight junction

ISS

Brain (GO term level: 10)

GO:0005783

endoplasmic reticulum

IDA

16780588

GO:0016021

integral to membrane

IEA

GO:0005886

plasma membrane

IDA

16780588

GO:0030054

cell junction

IEA

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
TJP1	DKFZp686M05161 \| MGC133289 \| ZO-1	tight junction protein 1 (zona occludens 1)	-	HPRD,BioGRID	10601346

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-539	307	313	m8	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.