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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: FAM55C

Summary

GeneID

91775

Symbol

FAM55C

Synonyms

FLJ30102|MGC15606|MST115|MSTP115

Description

family with sequence similarity 55, member C

Locus tag

Gene type

protein-coding

Map location

3q12.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.04047

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.04359

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005576

extracellular region

IEA

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-196	176	182	1A	hsa-miR-196a	UAGGUAGUUUCAUGUUGUUGG
miR-196	176	182	1A	hsa-miR-196b	UAGGUAGUUUCCUGUUGUUGG
miR-409-5p	253	259	1A	hsa-miR-409-5p	AGGUUACCCGAGCAACUUUGCA
miR-9	256	263	1A,m8	hsa-miR-9^SZ	UCUUUGGUUAUCUAGCUGUAUGA

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.