Gene Page

Gene Page: FNIP1

Summary

GeneID

96459

Symbol

FNIP1

Synonyms

DKFZp686E18167|DKFZp781P0215|KIAA1961|MGC667

Description

folliculin interacting protein 1

Locus tag

Gene type

protein-coding

Map location

5q23.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.0032

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005737

cytoplasm

IEA

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
FLCN	BHD \| DKFZp547A118 \| FLCL \| FLJ45004 \| FLJ99377 \| MGC17998 \| MGC23445	folliculin	Affinity Capture-MS Affinity Capture-Western Reconstituted Complex	BioGRID	17028174
HSP90AA1	FLJ31884 \| HSP86 \| HSP89A \| HSP90A \| HSP90N \| HSPC1 \| HSPCA \| HSPCAL1 \| HSPCAL4 \| HSPN \| Hsp89 \| Hsp90 \| LAP2	heat shock protein 90kDa alpha (cytosolic), class A member 1	Affinity Capture-MS	BioGRID	17028174
PRKAA1	AMPK \| AMPKa1 \| MGC33776 \| MGC57364	protein kinase, AMP-activated, alpha 1 catalytic subunit	Affinity Capture-Western Biochemical Activity Reconstituted Complex	BioGRID	17028174
PRKAB1	AMPK \| HAMPKb \| MGC17785	protein kinase, AMP-activated, beta 1 non-catalytic subunit	Affinity Capture-Western	BioGRID	17028174
PRKAG1	AMPKG \| MGC8666	protein kinase, AMP-activated, gamma 1 non-catalytic subunit	Affinity Capture-MS Affinity Capture-Western	BioGRID	17028174

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
let-7/98	1210	1217	1A,m8	hsa-let-7a^brain	UGAGGUAGUAGGUUGUAUAGUU
				hsa-let-7b^brain	UGAGGUAGUAGGUUGUGUGGUU
				hsa-let-7c^brain	UGAGGUAGUAGGUUGUAUGGUU
				hsa-let-7d^brain	AGAGGUAGUAGGUUGCAUAGU
				hsa-let-7e^brain	UGAGGUAGGAGGUUGUAUAGU
				hsa-let-7f^brain	UGAGGUAGUAGAUUGUAUAGUU
				hsa-miR-98^brain	UGAGGUAGUAAGUUGUAUUGUU
				hsa-let-7g^SZ	UGAGGUAGUAGUUUGUACAGU
				hsa-let-7i^brain	UGAGGUAGUAGUUUGUGCUGU
miR-15/16/195/424/497	2450	2457	1A,m8	hsa-miR-15a^brain	UAGCAGCACAUAAUGGUUUGUG
				hsa-miR-16^brain	UAGCAGCACGUAAAUAUUGGCG
				hsa-miR-15b^brain	UAGCAGCACAUCAUGGUUUACA
				hsa-miR-195^SZ	UAGCAGCACAGAAAUAUUGGC
				hsa-miR-424	CAGCAGCAAUUCAUGUUUUGAA
				hsa-miR-497	CAGCAGCACACUGUGGUUUGU
miR-188	2586	2592	m8	hsa-miR-188	CAUCCCUUGCAUGGUGGAGGGU
miR-196	1209	1215	m8	hsa-miR-196a	UAGGUAGUUUCAUGUUGUUGG
miR-196	1209	1215	m8	hsa-miR-196b	UAGGUAGUUUCCUGUUGUUGG
miR-203.1	2889	2895	m8	hsa-miR-203	UGAAAUGUUUAGGACCACUAG
miR-204/211	2585	2591	m8	hsa-miR-204^brain	UUCCCUUUGUCAUCCUAUGCCU
miR-204/211	2585	2591	m8	hsa-miR-211	UUCCCUUUGUCAUCCUUCGCCU
miR-208	2679	2685	1A	hsa-miR-208	AUAAGACGAGCAAAAAGCUUGU
miR-23	2482	2489	1A,m8	hsa-miR-23a^brain	AUCACAUUGCCAGGGAUUUCC
miR-23	2482	2489	1A,m8	hsa-miR-23b^brain	AUCACAUUGCCAGGGAUUACC
miR-25/32/92/363/367	2945	2952	1A,m8	hsa-miR-25^brain	CAUUGCACUUGUCUCGGUCUGA
				hsa-miR-32	UAUUGCACAUUACUAAGUUGC
				hsa-miR-92	UAUUGCACUUGUCCCGGCCUG
				hsa-miR-367	AAUUGCACUUUAGCAAUGGUGA
				hsa-miR-92b^SZ	UAUUGCACUCGUCCCGGCCUC
				hsa-miR-25^brain	CAUUGCACUUGUCUCGGUCUGA
				hsa-miR-32	UAUUGCACAUUACUAAGUUGC
				hsa-miR-92	UAUUGCACUUGUCCCGGCCUG
				hsa-miR-367	AAUUGCACUUUAGCAAUGGUGA
				hsa-miR-92b^SZ	UAUUGCACUCGUCCCGGCCUC
miR-26	1221	1227	m8	hsa-miR-26a^brain	UUCAAGUAAUCCAGGAUAGGC
miR-26	1221	1227	m8	hsa-miR-26b^SZ	UUCAAGUAAUUCAGGAUAGGUU
miR-323	2482	2488	1A	hsa-miR-323^brain	GCACAUUACACGGUCGACCUCU
miR-369-3p	2910	2917	1A,m8	hsa-miR-369-3p	AAUAAUACAUGGUUGAUCUUU
miR-374	2911	2918	1A,m8	hsa-miR-374	UUAUAAUACAACCUGAUAAGUG
miR-493-5p	2861	2867	m8	hsa-miR-493-5p	UUGUACAUGGUAGGCUUUCAUU
miR-493-5p	2861	2867	m8	hsa-miR-493-5p	UUGUACAUGGUAGGCUUUCAUU
miR-496	1166	1172	1A	hsa-miR-496	AUUACAUGGCCAAUCUC
miR-499	2679	2685	1A	hsa-miR-499	UUAAGACUUGCAGUGAUGUUUAA
miR-503	2451	2457	1A	hsa-miR-503	UAGCAGCGGGAACAGUUCUGCAG
miR-539	2891	2898	1A,m8	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU
miR-9	869	875	m8	hsa-miR-9^SZ	UCUUUGGUUAUCUAGCUGUAUGA

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.