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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: TTLL4

Summary

GeneID

9654

Symbol

TTLL4

Synonyms

KIAA0173

Description

tubulin tyrosine ligase-like family, member 4

Locus tag

Gene type

protein-coding

Map location

2p24.3-p24.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.00916

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.01016

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

KIAA0406

0.95

0.94

HEATR6

0.93

0.95

C17orf71

0.93

ZKSCAN5

0.93

CSTF1

0.93

0.94

PRPSAP1

0.93

0.92

RSPRY1

0.93

0.94

RAF1

0.92

0.94

C20orf11

0.92

0.93

SART3

0.92

0.93

Top 10 negatively co-expressed genes

MT-CO2

-0.79

-0.85

AF347015.31

-0.78

-0.84

AF347015.27

-0.77

-0.83

AF347015.21

-0.76

-0.88

AF347015.8

-0.76

-0.84

FXYD1

-0.76

-0.83

AF347015.33

-0.76

-0.82

IFI27

-0.75

-0.82

MT-CYB

-0.74

-0.81

AF347015.15

-0.71

-0.82

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0004835

tubulin-tyrosine ligase activity

IEA

GO:0016874

ligase activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006464

protein modification process

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005929

cilium

IEA

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
let-7/98	45	52	1A,m8	hsa-let-7a^brain	UGAGGUAGUAGGUUGUAUAGUU
				hsa-let-7b^brain	UGAGGUAGUAGGUUGUGUGGUU
				hsa-let-7c^brain	UGAGGUAGUAGGUUGUAUGGUU
				hsa-let-7d^brain	AGAGGUAGUAGGUUGCAUAGU
				hsa-let-7e^brain	UGAGGUAGGAGGUUGUAUAGU
				hsa-let-7f^brain	UGAGGUAGUAGAUUGUAUAGUU
				hsa-miR-98^brain	UGAGGUAGUAAGUUGUAUUGUU
				hsa-let-7g^SZ	UGAGGUAGUAGUUUGUACAGU
				hsa-let-7i^brain	UGAGGUAGUAGUUUGUGCUGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.