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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: SLC25A44

Summary

GeneID

9673

Symbol

SLC25A44

Synonyms

FLJ90431|KIAA0446|RP11-54H19.3

Description

solute carrier family 25, member 44

Locus tag

Gene type

protein-coding

Map location

1q22

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.0235

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.00814

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

AAMP

0.88

0.86

THAP4

0.87

0.85

PGS1

0.86

LONP1

0.86

0.85

COBRA1

0.86

0.83

HGS

0.86

DHX30

0.86

0.84

ANAPC2

0.85

0.84

ERCC2

0.85

0.81

EGLN2

0.85

0.83

Top 10 negatively co-expressed genes

AF347015.21

-0.71

-0.72

AF347015.31

-0.66

MT-CO2

-0.66

-0.65

AF347015.8

-0.65

AF347015.27

-0.65

AF347015.33

-0.62

-0.60

MT-CYB

-0.61

MT-ATP8

-0.60

-0.68

NOSTRIN

-0.59

-0.57

AF347015.15

-0.59

-0.61

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005488

binding

IEA

GO:0005215

transporter activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006810

transport

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005739

mitochondrion

IEA

GO:0005743

mitochondrial inner membrane

IEA

GO:0016020

membrane

IEA

GO:0016021

integral to membrane

IEA

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-148/152	2313	2319	m8	hsa-miR-148a	UCAGUGCACUACAGAACUUUGU
				hsa-miR-152^brain	UCAGUGCAUGACAGAACUUGGG
				hsa-miR-148b	UCAGUGCAUCACAGAACUUUGU
miR-27	679	685	1A	hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
miR-27	679	685	1A	hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
miR-29	1466	1472	1A	hsa-miR-29a^SZ	UAGCACCAUCUGAAAUCGGUU
				hsa-miR-29b^SZ	UAGCACCAUUUGAAAUCAGUGUU
				hsa-miR-29c^SZ	UAGCACCAUUUGAAAUCGGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.