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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: ZNF646

Summary

GeneID

9726

Symbol

ZNF646

Synonyms

KIAA0296

Description

zinc finger protein 646

Locus tag

Gene type

protein-coding

Map location

16p11.2

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.01775

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

AP2B1

0.94

0.95

AC007956.1

0.94

0.96

KIF3C

0.94

0.95

KLHL18

0.94

0.96

CEP68

0.93

0.95

NOLC1

0.93

PUM1

0.93

0.94

ARHGEF7

0.93

0.94

MAP3K7IP3

0.92

0.95

HGSNAT

0.92

0.93

Top 10 negatively co-expressed genes

FXYD1

-0.79

-0.81

MT-CO2

-0.78

-0.82

AF347015.31

-0.78

-0.81

HIGD1B

-0.75

-0.81

AF347015.33

-0.75

-0.77

AC021016.1

-0.75

-0.79

MT-CYB

-0.74

-0.78

AF347015.8

-0.74

-0.81

AF347015.27

-0.73

-0.78

AF347015.21

-0.73

-0.83

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0003676

nucleic acid binding

IEA

GO:0003677

DNA binding

IEA

GO:0008270

zinc ion binding

IEA

GO:0046872

metal ion binding

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006355

regulation of transcription, DNA-dependent

IEA

GO:0006350

transcription

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005622

intracellular

IEA

GO:0005634

nucleus

IEA

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
MDFI	I-MF \| I-mfa	MyoD family inhibitor	Two-hybrid	BioGRID	16189514
RP4-691N24.1	FLJ11792 \| KIAA0980 \| NLP \| dJ691N24.1	ninein-like	Two-hybrid	BioGRID	16189514
TRAF2	MGC:45012 \| TRAP \| TRAP3	TNF receptor-associated factor 2	Two-hybrid	BioGRID	16189514
UBE2I	C358B7.1 \| P18 \| UBC9	ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)	Two-hybrid	BioGRID	16189514

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-149	240	246	1A	hsa-miR-149^brain	UCUGGCUCCGUGUCUUCACUCC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.