Gene Page: KIAA0408

Summary
GeneID  9729
Symbol  KIAA0408
Synonyms  FLJ43995|RP3-403A15.2
Description  KIAA0408
See related  HGNC:21636|Ensembl:ENSG00000189367|HPRD:17187|
Locus tag  -
Gene type  protein-coding
Map location  6q22.33
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
NetworkShortest path distance of core genes in the Human protein-protein interaction networkContribution to shortest path in PPI network: 0.4754 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
CASK0.940.93
HP1BP30.940.93
ZNF5120.930.92
SBF20.930.94
TMCC10.930.92
SCAPER0.930.93
TTC170.930.93
C6orf1740.930.91
SUV420H10.920.94
ZNF450.920.92
Top 10 negatively co-expressed genes
AF347015.31-0.75-0.85
MT-CO2-0.75-0.86
C5orf53-0.74-0.73
AF347015.27-0.74-0.83
IFI27-0.74-0.83
HLA-F-0.73-0.74
FXYD1-0.73-0.82
AF347015.33-0.71-0.80
MT-CYB-0.71-0.81
AIFM3-0.70-0.71
Protein-protein InteractionsShown by network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
ABI3NESH | SSH3BP3ABI family, member 3Two-hybridBioGRID16189514 
AP2B1ADTB2 | AP105B | AP2-BETA | CLAPB1 | DKFZp781K0743adaptor-related protein complex 2, beta 1 subunitTwo-hybridBioGRID16189514 
BEGAINKIAA1446brain-enriched guanylate kinase-associated homolog (rat)Two-hybridBioGRID16189514 
CARD9hCARD9caspase recruitment domain family, member 9Two-hybridBioGRID16189514 
CCDC85BDIPAcoiled-coil domain containing 85BTwo-hybridBioGRID16189514 
CEP72FLJ10565 | KIAA1519 | MGC5307centrosomal protein 72kDaTwo-hybridBioGRID16189514 
GFAPFLJ45472glial fibrillary acidic proteinTwo-hybridBioGRID16189514 
HOOK2FLJ26218 | HK2hook homolog 2 (Drosophila)Two-hybridBioGRID16189514 
KRT15CK15 | K15 | K1COkeratin 15Two-hybridBioGRID16189514 
MAGEA11MAGE-11 | MAGE11 | MAGEA-11 | MGC10511melanoma antigen family A, 11Two-hybridBioGRID16189514 
MDFII-MF | I-mfaMyoD family inhibitorTwo-hybridBioGRID16189514 
SFNYWHASstratifinTwo-hybridBioGRID16189514 
SORBS3SCAM-1 | SCAM1 | SH3D4 | VINEXINsorbin and SH3 domain containing 3Two-hybridBioGRID16189514 
TEX11TGC1 | TSGA3testis expressed 11Two-hybridBioGRID16189514 
TRAF2MGC:45012 | TRAP | TRAP3TNF receptor-associated factor 2Two-hybridBioGRID16189514 
TRIM37KIAA0898 | MUL | POB1 | TEF3tripartite motif-containing 37Two-hybridBioGRID16189514 
VIMFLJ36605vimentinTwo-hybridBioGRID16189514 
YWHAG14-3-3GAMMAtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptideTwo-hybridBioGRID16189514 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-124.127302736m8hsa-miR-124aUUAAGGCACGCGGUGAAUGCCA
miR-124/506273027361Ahsa-miR-506UAAGGCACCCUUCUGAGUAGA
hsa-miR-124brainUAAGGCACGCGGUGAAUGCC
miR-141/200a129135m8hsa-miR-141UAACACUGUCUGGUAAAGAUGG
hsa-miR-200aUAACACUGUCUGGUAACGAUGU
miR-30-5p66731A,m8hsa-miR-30a-5pUGUAAACAUCCUCGACUGGAAG
hsa-miR-30cbrainUGUAAACAUCCUACACUCUCAGC
hsa-miR-30dSZUGUAAACAUCCCCGACUGGAAG
hsa-miR-30bSZUGUAAACAUCCUACACUCAGCU
hsa-miR-30e-5pUGUAAACAUCCUUGACUGGA
miR-3743853911Ahsa-miR-374UUAUAAUACAACCUGAUAAGUG
miR-505371377m8hsa-miR-505GUCAACACUUGCUGGUUUCCUC
miR-5442702761Ahsa-miR-544AUUCUGCAUUUUUAGCAAGU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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