Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Distanceb | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs1480380 | chr6 | 32913246 | T | T | -1E0 | -1 | intergenic | HLA-DMB, HLA-DMA, | dist=4399; dist=3145 | CV:GWAScat, CV:GWASdb | N | N | N | N |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr6 | 32943156 | 32943196 | E067 | 29910 |
| chr6 | 32943367 | 32943460 | E067 | 30121 |
| chr6 | 32943475 | 32943570 | E067 | 30229 |
| chr6 | 32943638 | 32943705 | E067 | 30392 |
| chr6 | 32943874 | 32943949 | E067 | 30628 |
| chr6 | 32944176 | 32944273 | E067 | 30930 |
| chr6 | 32944317 | 32944367 | E067 | 31071 |
| chr6 | 32944394 | 32944438 | E067 | 31148 |
| chr6 | 32944477 | 32944531 | E067 | 31231 |
| chr6 | 32944572 | 32944664 | E067 | 31326 |
| chr6 | 32944678 | 32944793 | E067 | 31432 |
| chr6 | 32944971 | 32945018 | E067 | 31725 |
| chr6 | 32945198 | 32945484 | E067 | 31952 |
| chr6 | 32945525 | 32945595 | E067 | 32279 |
| chr6 | 32945607 | 32945695 | E067 | 32361 |
| chr6 | 32945725 | 32945782 | E067 | 32479 |
| chr6 | 32916286 | 32916425 | E068 | 3040 |
| chr6 | 32934605 | 32934672 | E068 | 21359 |
| chr6 | 32943367 | 32943460 | E068 | 30121 |
| chr6 | 32943475 | 32943570 | E068 | 30229 |
| chr6 | 32943638 | 32943705 | E068 | 30392 |
| chr6 | 32943874 | 32943949 | E068 | 30628 |
| chr6 | 32944176 | 32944273 | E068 | 30930 |
| chr6 | 32944317 | 32944367 | E068 | 31071 |
| chr6 | 32944394 | 32944438 | E068 | 31148 |
| chr6 | 32944477 | 32944531 | E068 | 31231 |
| chr6 | 32944572 | 32944664 | E068 | 31326 |
| chr6 | 32944678 | 32944793 | E068 | 31432 |
| chr6 | 32944971 | 32945018 | E068 | 31725 |
| chr6 | 32945198 | 32945484 | E068 | 31952 |
| chr6 | 32945525 | 32945595 | E068 | 32279 |
| chr6 | 32945607 | 32945695 | E068 | 32361 |
| chr6 | 32945725 | 32945782 | E068 | 32479 |
| chr6 | 32945849 | 32946031 | E068 | 32603 |
| chr6 | 32946045 | 32946095 | E068 | 32799 |
| chr6 | 32864026 | 32864097 | E069 | 49149 |
| chr6 | 32864123 | 32864236 | E069 | 49010 |
| chr6 | 32943156 | 32943196 | E069 | 29910 |
| chr6 | 32943367 | 32943460 | E069 | 30121 |
| chr6 | 32943475 | 32943570 | E069 | 30229 |
| chr6 | 32943638 | 32943705 | E069 | 30392 |
| chr6 | 32943874 | 32943949 | E069 | 30628 |
| chr6 | 32944176 | 32944273 | E069 | 30930 |
| chr6 | 32944317 | 32944367 | E069 | 31071 |
| chr6 | 32944394 | 32944438 | E069 | 31148 |
| chr6 | 32944477 | 32944531 | E069 | 31231 |
| chr6 | 32944572 | 32944664 | E069 | 31326 |
| chr6 | 32944678 | 32944793 | E069 | 31432 |
| chr6 | 32944971 | 32945018 | E069 | 31725 |
| chr6 | 32945198 | 32945484 | E069 | 31952 |
| chr6 | 32945525 | 32945595 | E069 | 32279 |
| chr6 | 32945607 | 32945695 | E069 | 32361 |
| chr6 | 32945725 | 32945782 | E069 | 32479 |
| chr6 | 32945849 | 32946031 | E069 | 32603 |
| chr6 | 32946045 | 32946095 | E069 | 32799 |
| chr6 | 32946379 | 32946744 | E069 | 33133 |
| chr6 | 32864631 | 32864743 | E070 | 48503 |
| chr6 | 32864776 | 32864826 | E070 | 48420 |
| chr6 | 32921567 | 32921756 | E070 | 8321 |
| chr6 | 32943638 | 32943705 | E070 | 30392 |
| chr6 | 32943874 | 32943949 | E070 | 30628 |
| chr6 | 32944176 | 32944273 | E070 | 30930 |
| chr6 | 32944317 | 32944367 | E070 | 31071 |
| chr6 | 32944394 | 32944438 | E070 | 31148 |
| chr6 | 32944477 | 32944531 | E070 | 31231 |
| chr6 | 32944572 | 32944664 | E070 | 31326 |
| chr6 | 32944678 | 32944793 | E070 | 31432 |
| chr6 | 32900085 | 32900140 | E071 | 13106 |
| chr6 | 32900247 | 32900327 | E071 | 12919 |
| chr6 | 32900387 | 32900506 | E071 | 12740 |
| chr6 | 32943156 | 32943196 | E071 | 29910 |
| chr6 | 32943367 | 32943460 | E071 | 30121 |
| chr6 | 32943475 | 32943570 | E071 | 30229 |
| chr6 | 32943638 | 32943705 | E071 | 30392 |
| chr6 | 32943874 | 32943949 | E071 | 30628 |
| chr6 | 32944176 | 32944273 | E071 | 30930 |
| chr6 | 32944317 | 32944367 | E071 | 31071 |
| chr6 | 32944394 | 32944438 | E071 | 31148 |
| chr6 | 32944477 | 32944531 | E071 | 31231 |
| chr6 | 32944572 | 32944664 | E071 | 31326 |
| chr6 | 32944678 | 32944793 | E071 | 31432 |
| chr6 | 32944971 | 32945018 | E071 | 31725 |
| chr6 | 32945198 | 32945484 | E071 | 31952 |
| chr6 | 32945525 | 32945595 | E071 | 32279 |
| chr6 | 32945607 | 32945695 | E071 | 32361 |
| chr6 | 32945725 | 32945782 | E071 | 32479 |
| chr6 | 32945849 | 32946031 | E071 | 32603 |
| chr6 | 32946045 | 32946095 | E071 | 32799 |
| chr6 | 32946379 | 32946744 | E071 | 33133 |
| chr6 | 32952184 | 32952993 | E071 | 38938 |
| chr6 | 32934605 | 32934672 | E072 | 21359 |
| chr6 | 32943156 | 32943196 | E072 | 29910 |
| chr6 | 32943367 | 32943460 | E072 | 30121 |
| chr6 | 32943475 | 32943570 | E072 | 30229 |
| chr6 | 32943638 | 32943705 | E072 | 30392 |
| chr6 | 32943874 | 32943949 | E072 | 30628 |
| chr6 | 32944176 | 32944273 | E072 | 30930 |
| chr6 | 32944317 | 32944367 | E072 | 31071 |
| chr6 | 32944394 | 32944438 | E072 | 31148 |
| chr6 | 32944477 | 32944531 | E072 | 31231 |
| chr6 | 32944572 | 32944664 | E072 | 31326 |
| chr6 | 32944678 | 32944793 | E072 | 31432 |
| chr6 | 32944971 | 32945018 | E072 | 31725 |
| chr6 | 32945198 | 32945484 | E072 | 31952 |
| chr6 | 32945525 | 32945595 | E072 | 32279 |
| chr6 | 32945607 | 32945695 | E072 | 32361 |
| chr6 | 32945725 | 32945782 | E072 | 32479 |
| chr6 | 32945849 | 32946031 | E072 | 32603 |
| chr6 | 32946045 | 32946095 | E072 | 32799 |
| chr6 | 32943156 | 32943196 | E073 | 29910 |
| chr6 | 32943367 | 32943460 | E073 | 30121 |
| chr6 | 32943475 | 32943570 | E073 | 30229 |
| chr6 | 32943638 | 32943705 | E073 | 30392 |
| chr6 | 32943874 | 32943949 | E073 | 30628 |
| chr6 | 32944176 | 32944273 | E073 | 30930 |
| chr6 | 32944317 | 32944367 | E073 | 31071 |
| chr6 | 32944394 | 32944438 | E073 | 31148 |
| chr6 | 32944477 | 32944531 | E073 | 31231 |
| chr6 | 32944572 | 32944664 | E073 | 31326 |
| chr6 | 32944678 | 32944793 | E073 | 31432 |
| chr6 | 32944971 | 32945018 | E073 | 31725 |
| chr6 | 32945198 | 32945484 | E073 | 31952 |
| chr6 | 32945525 | 32945595 | E073 | 32279 |
| chr6 | 32944971 | 32945018 | E074 | 31725 |
| chr6 | 32880663 | 32880717 | E081 | 32529 |
| chr6 | 32942880 | 32942934 | E081 | 29634 |
| chr6 | 32943156 | 32943196 | E081 | 29910 |
| chr6 | 32864026 | 32864097 | E082 | 49149 |
| chr6 | 32864123 | 32864236 | E082 | 49010 |
| chr6 | 32864631 | 32864743 | E082 | 48503 |
| chr6 | 32864776 | 32864826 | E082 | 48420 |
| chr6 | 32880663 | 32880717 | E082 | 32529 |
| chr6 | 32880727 | 32881095 | E082 | 32151 |
| chr6 | 32944572 | 32944664 | E082 | 31326 |
| chr6 | 32944678 | 32944793 | E082 | 31432 |
| chr6 | 32944971 | 32945018 | E082 | 31725 |
| chr6 | 32945198 | 32945484 | E082 | 31952 |
| chr6 | 32945525 | 32945595 | E082 | 32279 |
| chr6 | 32945607 | 32945695 | E082 | 32361 |
| chr6 | 32945725 | 32945782 | E082 | 32479 |
| chr6 | 32945849 | 32946031 | E082 | 32603 |
| chr6 | 32946045 | 32946095 | E082 | 32799 |
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr6 | 32920401 | 32920531 | E067 | 7155 |
| chr6 | 32934791 | 32942861 | E067 | 21545 |
| chr6 | 32920401 | 32920531 | E068 | 7155 |
| chr6 | 32934791 | 32942861 | E068 | 21545 |
| chr6 | 32920401 | 32920531 | E069 | 7155 |
| chr6 | 32934791 | 32942861 | E069 | 21545 |
| chr6 | 32934791 | 32942861 | E070 | 21545 |
| chr6 | 32920401 | 32920531 | E071 | 7155 |
| chr6 | 32934791 | 32942861 | E071 | 21545 |
| chr6 | 32920401 | 32920531 | E072 | 7155 |
| chr6 | 32934791 | 32942861 | E072 | 21545 |
| chr6 | 32920401 | 32920531 | E073 | 7155 |
| chr6 | 32934791 | 32942861 | E073 | 21545 |
| chr6 | 32920401 | 32920531 | E074 | 7155 |
| chr6 | 32934791 | 32942861 | E074 | 21545 |
| chr6 | 32934791 | 32942861 | E081 | 21545 |
| chr6 | 32934791 | 32942861 | E082 | 21545 |