Search results:
SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs1494961 | chr4 | 84374480 | T | C | 0.115 | 0.983 | exonic | HELQ, | CV:PheWAS | Y | N | N | N |
eQTL annotation | ||||||||
SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
---|---|---|---|---|---|---|---|---|
rs1494961 | 4 | 84374480 | SLC25A14P1 | ENSG00000213608.5 | 7.524E-8 | 3.00328E-3 | -24197 | gtex_brain_ba24 |
There is no meQTL for this SNP.
Enhancer annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr4 | 84374964 | 84375023 | E067 | 484 |
chr4 | 84375246 | 84375296 | E067 | 766 |
chr4 | 84378311 | 84378351 | E067 | 3831 |
chr4 | 84370330 | 84370464 | E068 | 4016 |
chr4 | 84378311 | 84378351 | E068 | 3831 |
chr4 | 84378919 | 84379163 | E068 | 4439 |
chr4 | 84374964 | 84375023 | E069 | 484 |
chr4 | 84375246 | 84375296 | E069 | 766 |
chr4 | 84378311 | 84378351 | E070 | 3831 |
chr4 | 84374964 | 84375023 | E071 | 484 |
chr4 | 84375246 | 84375296 | E071 | 766 |
chr4 | 84378311 | 84378351 | E071 | 3831 |
chr4 | 84378919 | 84379163 | E071 | 4439 |
chr4 | 84375246 | 84375296 | E072 | 766 |
chr4 | 84378311 | 84378351 | E072 | 3831 |
chr4 | 84378311 | 84378351 | E073 | 3831 |
chr4 | 84378919 | 84379163 | E073 | 4439 |
chr4 | 84370330 | 84370464 | E074 | 4016 |
chr4 | 84378919 | 84379163 | E074 | 4439 |
chr4 | 84375246 | 84375296 | E081 | 766 |
chr4 | 84375246 | 84375296 | E082 | 766 |
chr4 | 84404823 | 84404947 | E082 | 30343 |
Promoter annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr4 | 84375810 | 84377754 | E067 | 1330 |
chr4 | 84405502 | 84406838 | E067 | 31022 |
chr4 | 84375810 | 84377754 | E068 | 1330 |
chr4 | 84405502 | 84406838 | E068 | 31022 |
chr4 | 84375810 | 84377754 | E069 | 1330 |
chr4 | 84405502 | 84406838 | E069 | 31022 |
chr4 | 84375810 | 84377754 | E070 | 1330 |
chr4 | 84405502 | 84406838 | E070 | 31022 |
chr4 | 84375810 | 84377754 | E071 | 1330 |
chr4 | 84405502 | 84406838 | E071 | 31022 |
chr4 | 84375810 | 84377754 | E072 | 1330 |
chr4 | 84405502 | 84406838 | E072 | 31022 |
chr4 | 84375810 | 84377754 | E073 | 1330 |
chr4 | 84405502 | 84406838 | E073 | 31022 |
chr4 | 84375810 | 84377754 | E074 | 1330 |
chr4 | 84405502 | 84406838 | E074 | 31022 |
chr4 | 84405502 | 84406838 | E081 | 31022 |
chr4 | 84375810 | 84377754 | E082 | 1330 |
chr4 | 84405502 | 84406838 | E082 | 31022 |