Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Distanceb | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs1533087 | chr20 | 594780 | T | T | 0.407 | 0.991 | intergenic | TCF15, SRXN1, | dist=3870; dist=32488 | CV:GWAScat, CV:GWASdb | N | N | N | N |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr20 | 614737 | 614787 | E068 | 19957 |
| chr20 | 614854 | 615528 | E068 | 20074 |
| chr20 | 615585 | 615738 | E068 | 20805 |
| chr20 | 625747 | 625852 | E068 | 30967 |
| chr20 | 625932 | 626693 | E068 | 31152 |
| chr20 | 626721 | 626871 | E068 | 31941 |
| chr20 | 632352 | 632406 | E068 | 37572 |
| chr20 | 635115 | 635190 | E068 | 40335 |
| chr20 | 635248 | 635309 | E068 | 40468 |
| chr20 | 635328 | 635404 | E068 | 40548 |
| chr20 | 635520 | 635560 | E068 | 40740 |
| chr20 | 636176 | 636281 | E068 | 41396 |
| chr20 | 614737 | 614787 | E069 | 19957 |
| chr20 | 614854 | 615528 | E069 | 20074 |
| chr20 | 615585 | 615738 | E069 | 20805 |
| chr20 | 615860 | 615963 | E069 | 21080 |
| chr20 | 616026 | 616240 | E069 | 21246 |
| chr20 | 551968 | 552098 | E070 | 42682 |
| chr20 | 552218 | 552318 | E070 | 42462 |
| chr20 | 592408 | 592958 | E070 | 1822 |
| chr20 | 613108 | 613158 | E070 | 18328 |
| chr20 | 613237 | 613329 | E070 | 18457 |
| chr20 | 613934 | 613992 | E070 | 19154 |
| chr20 | 614048 | 614169 | E070 | 19268 |
| chr20 | 614366 | 614416 | E070 | 19586 |
| chr20 | 614509 | 614569 | E070 | 19729 |
| chr20 | 615860 | 615963 | E070 | 21080 |
| chr20 | 616026 | 616240 | E070 | 21246 |
| chr20 | 616368 | 616418 | E070 | 21588 |
| chr20 | 616449 | 616523 | E070 | 21669 |
| chr20 | 616574 | 616695 | E070 | 21794 |
| chr20 | 640619 | 640731 | E070 | 45839 |
| chr20 | 643636 | 643744 | E070 | 48856 |
| chr20 | 552218 | 552318 | E071 | 42462 |
| chr20 | 592408 | 592958 | E071 | 1822 |
| chr20 | 614854 | 615528 | E071 | 20074 |
| chr20 | 615585 | 615738 | E071 | 20805 |
| chr20 | 615860 | 615963 | E071 | 21080 |
| chr20 | 614737 | 614787 | E072 | 19957 |
| chr20 | 614854 | 615528 | E072 | 20074 |
| chr20 | 615585 | 615738 | E072 | 20805 |
| chr20 | 615860 | 615963 | E072 | 21080 |
| chr20 | 625932 | 626693 | E072 | 31152 |
| chr20 | 614854 | 615528 | E073 | 20074 |
| chr20 | 615585 | 615738 | E073 | 20805 |
| chr20 | 615860 | 615963 | E073 | 21080 |
| chr20 | 614854 | 615528 | E074 | 20074 |
| chr20 | 615585 | 615738 | E074 | 20805 |
| chr20 | 615860 | 615963 | E074 | 21080 |
| chr20 | 552218 | 552318 | E081 | 42462 |
| chr20 | 613934 | 613992 | E081 | 19154 |
| chr20 | 614048 | 614169 | E081 | 19268 |
| chr20 | 614366 | 614416 | E081 | 19586 |
| chr20 | 614509 | 614569 | E081 | 19729 |
| chr20 | 614737 | 614787 | E081 | 19957 |
| chr20 | 614854 | 615528 | E081 | 20074 |
| chr20 | 615585 | 615738 | E081 | 20805 |
| chr20 | 615860 | 615963 | E081 | 21080 |
| chr20 | 616026 | 616240 | E081 | 21246 |
| chr20 | 616368 | 616418 | E081 | 21588 |
| chr20 | 616449 | 616523 | E081 | 21669 |
| chr20 | 616574 | 616695 | E081 | 21794 |
| chr20 | 626958 | 627118 | E081 | 32178 |
| chr20 | 641619 | 641859 | E081 | 46839 |
| chr20 | 641986 | 642036 | E081 | 47206 |
| chr20 | 642169 | 642219 | E081 | 47389 |
| chr20 | 642306 | 642362 | E081 | 47526 |
| chr20 | 643636 | 643744 | E081 | 48856 |
| chr20 | 594037 | 594134 | E082 | 646 |
| chr20 | 614048 | 614169 | E082 | 19268 |
| chr20 | 614366 | 614416 | E082 | 19586 |
| chr20 | 614509 | 614569 | E082 | 19729 |
| chr20 | 614737 | 614787 | E082 | 19957 |
| chr20 | 614854 | 615528 | E082 | 20074 |
| chr20 | 615585 | 615738 | E082 | 20805 |
| chr20 | 615860 | 615963 | E082 | 21080 |
| chr20 | 616026 | 616240 | E082 | 21246 |
| chr20 | 616368 | 616418 | E082 | 21588 |
| chr20 | 625932 | 626693 | E082 | 31152 |
| chr20 | 641986 | 642036 | E082 | 47206 |
| chr20 | 642169 | 642219 | E082 | 47389 |
| chr20 | 642306 | 642362 | E082 | 47526 |
| chr20 | 643636 | 643744 | E082 | 48856 |
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr20 | 589921 | 590008 | E067 | 4772 |
| chr20 | 590072 | 590266 | E067 | 4514 |
| chr20 | 632640 | 635103 | E067 | 37860 |
| chr20 | 623081 | 624373 | E068 | 28301 |
| chr20 | 632640 | 635103 | E068 | 37860 |
| chr20 | 632640 | 635103 | E069 | 37860 |
| chr20 | 589921 | 590008 | E070 | 4772 |
| chr20 | 590072 | 590266 | E070 | 4514 |
| chr20 | 590337 | 591339 | E070 | 3441 |
| chr20 | 591375 | 591540 | E070 | 3240 |
| chr20 | 632640 | 635103 | E070 | 37860 |
| chr20 | 623081 | 624373 | E071 | 28301 |
| chr20 | 632640 | 635103 | E071 | 37860 |
| chr20 | 589921 | 590008 | E072 | 4772 |
| chr20 | 590072 | 590266 | E072 | 4514 |
| chr20 | 632640 | 635103 | E072 | 37860 |
| chr20 | 590072 | 590266 | E073 | 4514 |
| chr20 | 590337 | 591339 | E073 | 3441 |
| chr20 | 632640 | 635103 | E073 | 37860 |
| chr20 | 632640 | 635103 | E074 | 37860 |
| chr20 | 589921 | 590008 | E082 | 4772 |
| chr20 | 590072 | 590266 | E082 | 4514 |
| chr20 | 590337 | 591339 | E082 | 3441 |
| chr20 | 591375 | 591540 | E082 | 3240 |
| chr20 | 623081 | 624373 | E082 | 28301 |
| chr20 | 632640 | 635103 | E082 | 37860 |