Search results:
SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs1538774 | chr1 | 243544827 | C | G | 3.417E-8 | 0.933 | intronic | SDCCAG8, | CV:GWAScat, CV:GWASdb, CV:PGCnp, CV:Ripke_2013 | N | N | N | Y |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr1 | 243570372 | 243570452 | E067 | 25545 |
chr1 | 243570466 | 243570680 | E067 | 25639 |
chr1 | 243570735 | 243570894 | E067 | 25908 |
chr1 | 243579074 | 243580191 | E067 | 34247 |
chr1 | 243507321 | 243507672 | E068 | 37155 |
chr1 | 243578921 | 243578971 | E068 | 34094 |
chr1 | 243579074 | 243580191 | E068 | 34247 |
chr1 | 243583561 | 243583611 | E068 | 38734 |
chr1 | 243584059 | 243584109 | E068 | 39232 |
chr1 | 243508719 | 243508827 | E069 | 36000 |
chr1 | 243509087 | 243509229 | E069 | 35598 |
chr1 | 243518487 | 243518559 | E069 | 26268 |
chr1 | 243518747 | 243518880 | E069 | 25947 |
chr1 | 243554710 | 243554760 | E069 | 9883 |
chr1 | 243578921 | 243578971 | E069 | 34094 |
chr1 | 243579074 | 243580191 | E069 | 34247 |
chr1 | 243580330 | 243580614 | E069 | 35503 |
chr1 | 243543499 | 243544480 | E070 | 347 |
chr1 | 243578921 | 243578971 | E070 | 34094 |
chr1 | 243579074 | 243580191 | E070 | 34247 |
chr1 | 243580330 | 243580614 | E070 | 35503 |
chr1 | 243580654 | 243580850 | E070 | 35827 |
chr1 | 243581025 | 243581077 | E070 | 36198 |
chr1 | 243585838 | 243586027 | E070 | 41011 |
chr1 | 243578921 | 243578971 | E071 | 34094 |
chr1 | 243579074 | 243580191 | E071 | 34247 |
chr1 | 243580330 | 243580614 | E071 | 35503 |
chr1 | 243580654 | 243580850 | E071 | 35827 |
chr1 | 243584059 | 243584109 | E071 | 39232 |
chr1 | 243509087 | 243509229 | E072 | 35598 |
chr1 | 243518487 | 243518559 | E072 | 26268 |
chr1 | 243518747 | 243518880 | E072 | 25947 |
chr1 | 243539176 | 243539253 | E072 | 5574 |
chr1 | 243578921 | 243578971 | E072 | 34094 |
chr1 | 243583561 | 243583611 | E072 | 38734 |
chr1 | 243579074 | 243580191 | E073 | 34247 |
chr1 | 243518487 | 243518559 | E074 | 26268 |
chr1 | 243578921 | 243578971 | E074 | 34094 |
chr1 | 243579074 | 243580191 | E074 | 34247 |
chr1 | 243580330 | 243580614 | E074 | 35503 |
chr1 | 243580654 | 243580850 | E074 | 35827 |
chr1 | 243507321 | 243507672 | E081 | 37155 |
chr1 | 243507691 | 243508281 | E081 | 36546 |
chr1 | 243508719 | 243508827 | E081 | 36000 |
chr1 | 243509087 | 243509229 | E081 | 35598 |
chr1 | 243509280 | 243510333 | E081 | 34494 |
chr1 | 243514354 | 243514966 | E081 | 29861 |
chr1 | 243515220 | 243515276 | E081 | 29551 |
chr1 | 243515700 | 243515753 | E081 | 29074 |
chr1 | 243516446 | 243516528 | E081 | 28299 |
chr1 | 243518487 | 243518559 | E081 | 26268 |
chr1 | 243518747 | 243518880 | E081 | 25947 |
chr1 | 243540305 | 243540365 | E081 | 4462 |
chr1 | 243541653 | 243541708 | E081 | 3119 |
chr1 | 243543499 | 243544480 | E081 | 347 |
chr1 | 243552989 | 243553029 | E081 | 8162 |
chr1 | 243553066 | 243553135 | E081 | 8239 |
chr1 | 243554710 | 243554760 | E081 | 9883 |
chr1 | 243555425 | 243555488 | E081 | 10598 |
chr1 | 243558013 | 243558697 | E081 | 13186 |
chr1 | 243559401 | 243559766 | E081 | 14574 |
chr1 | 243562210 | 243562303 | E081 | 17383 |
chr1 | 243564109 | 243564176 | E081 | 19282 |
chr1 | 243564458 | 243564508 | E081 | 19631 |
chr1 | 243569802 | 243570131 | E081 | 24975 |
chr1 | 243570372 | 243570452 | E081 | 25545 |
chr1 | 243570466 | 243570680 | E081 | 25639 |
chr1 | 243577492 | 243577624 | E081 | 32665 |
chr1 | 243578921 | 243578971 | E081 | 34094 |
chr1 | 243579074 | 243580191 | E081 | 34247 |
chr1 | 243580330 | 243580614 | E081 | 35503 |
chr1 | 243580654 | 243580850 | E081 | 35827 |
chr1 | 243581025 | 243581077 | E081 | 36198 |
chr1 | 243581295 | 243581345 | E081 | 36468 |
chr1 | 243583561 | 243583611 | E081 | 38734 |
chr1 | 243584059 | 243584109 | E081 | 39232 |
chr1 | 243584364 | 243585554 | E081 | 39537 |
chr1 | 243585838 | 243586027 | E081 | 41011 |
chr1 | 243586317 | 243586383 | E081 | 41490 |
chr1 | 243506884 | 243506934 | E082 | 37893 |
chr1 | 243508719 | 243508827 | E082 | 36000 |
chr1 | 243509087 | 243509229 | E082 | 35598 |
chr1 | 243509280 | 243510333 | E082 | 34494 |
chr1 | 243515220 | 243515276 | E082 | 29551 |
chr1 | 243515700 | 243515753 | E082 | 29074 |
chr1 | 243543499 | 243544480 | E082 | 347 |
chr1 | 243552989 | 243553029 | E082 | 8162 |
chr1 | 243553066 | 243553135 | E082 | 8239 |
chr1 | 243554710 | 243554760 | E082 | 9883 |
chr1 | 243555425 | 243555488 | E082 | 10598 |
chr1 | 243559229 | 243559399 | E082 | 14402 |
chr1 | 243559401 | 243559766 | E082 | 14574 |
chr1 | 243569802 | 243570131 | E082 | 24975 |
chr1 | 243570372 | 243570452 | E082 | 25545 |
chr1 | 243570466 | 243570680 | E082 | 25639 |
chr1 | 243578921 | 243578971 | E082 | 34094 |
chr1 | 243579074 | 243580191 | E082 | 34247 |
chr1 | 243580330 | 243580614 | E082 | 35503 |
chr1 | 243580654 | 243580850 | E082 | 35827 |
chr1 | 243581025 | 243581077 | E082 | 36198 |
chr1 | 243581295 | 243581345 | E082 | 36468 |
chr1 | 243583561 | 243583611 | E082 | 38734 |
chr1 | 243584059 | 243584109 | E082 | 39232 |
Promoter annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr1 | 243517774 | 243517904 | E067 | 26923 |
chr1 | 243517916 | 243518083 | E067 | 26744 |
chr1 | 243518180 | 243518308 | E067 | 26519 |
chr1 | 243517774 | 243517904 | E068 | 26923 |
chr1 | 243517916 | 243518083 | E068 | 26744 |
chr1 | 243518180 | 243518308 | E068 | 26519 |
chr1 | 243518180 | 243518308 | E069 | 26519 |
chr1 | 243517774 | 243517904 | E071 | 26923 |
chr1 | 243517916 | 243518083 | E071 | 26744 |
chr1 | 243518180 | 243518308 | E071 | 26519 |
chr1 | 243517774 | 243517904 | E072 | 26923 |
chr1 | 243517916 | 243518083 | E072 | 26744 |
chr1 | 243518180 | 243518308 | E072 | 26519 |
chr1 | 243517774 | 243517904 | E073 | 26923 |
chr1 | 243517916 | 243518083 | E073 | 26744 |
chr1 | 243518180 | 243518308 | E073 | 26519 |
chr1 | 243517774 | 243517904 | E074 | 26923 |
chr1 | 243517916 | 243518083 | E074 | 26744 |
chr1 | 243518180 | 243518308 | E074 | 26519 |
chr1 | 243558888 | 243559056 | E082 | 14061 |