Search results:
SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Distanceb | Source | eSNP | meSNP | In CNV | In Linkage |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs16865258 | chr3 | 189997396 | C | T | -1E0 | -1 | intergenic | P3H2-AS1, CLDN1, | dist=134761; dist=26094 | CV:GWAScat, CV:GWASdb | N | N | N | N |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr3 | 189976468 | 189976755 | E067 | 20641 |
chr3 | 189976468 | 189976755 | E068 | 20641 |
chr3 | 189999162 | 189999573 | E068 | 1766 |
chr3 | 189976468 | 189976755 | E071 | 20641 |
chr3 | 189978848 | 189979058 | E071 | 18338 |
chr3 | 189976468 | 189976755 | E072 | 20641 |
chr3 | 189952356 | 189952874 | E081 | 44522 |
chr3 | 189952982 | 189953064 | E081 | 44332 |
chr3 | 190043474 | 190043533 | E081 | 46078 |
chr3 | 190043591 | 190043673 | E081 | 46195 |
chr3 | 190043776 | 190044022 | E081 | 46380 |
chr3 | 190044062 | 190044148 | E081 | 46666 |
chr3 | 190044304 | 190044381 | E081 | 46908 |
chr3 | 190044571 | 190044636 | E081 | 47175 |
chr3 | 190044695 | 190044759 | E081 | 47299 |
chr3 | 190044802 | 190045054 | E081 | 47406 |
chr3 | 190045497 | 190045617 | E081 | 48101 |
chr3 | 190044062 | 190044148 | E082 | 46666 |
chr3 | 190044304 | 190044381 | E082 | 46908 |
chr3 | 190044571 | 190044636 | E082 | 47175 |
chr3 | 190044695 | 190044759 | E082 | 47299 |
chr3 | 190044802 | 190045054 | E082 | 47406 |
Promoter annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr3 | 190039515 | 190041341 | E067 | 42119 |
chr3 | 190039438 | 190039508 | E068 | 42042 |
chr3 | 190039515 | 190041341 | E068 | 42119 |
chr3 | 190039438 | 190039508 | E069 | 42042 |
chr3 | 190039515 | 190041341 | E069 | 42119 |
chr3 | 190038810 | 190038987 | E071 | 41414 |
chr3 | 190039109 | 190039169 | E071 | 41713 |
chr3 | 190039438 | 190039508 | E071 | 42042 |
chr3 | 190039515 | 190041341 | E071 | 42119 |
chr3 | 190039438 | 190039508 | E072 | 42042 |
chr3 | 190039515 | 190041341 | E072 | 42119 |
chr3 | 190039515 | 190041341 | E073 | 42119 |
chr3 | 190039515 | 190041341 | E074 | 42119 |
chr3 | 190039515 | 190041341 | E082 | 42119 |