Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs16887244 | chr8 | 38031345 | A | G | 1.509E-5 | 1.055 | intronic | LSM1, | CV:GWAScat, CV:GWASdb, CV:PGCnp | N | N | N | N |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr8 | 38026879 | 38026948 | E067 | 4397 |
| chr8 | 38031672 | 38031847 | E067 | 327 |
| chr8 | 38031945 | 38032004 | E067 | 600 |
| chr8 | 38032035 | 38032081 | E067 | 690 |
| chr8 | 38032143 | 38032202 | E067 | 798 |
| chr8 | 38032465 | 38032522 | E067 | 1120 |
| chr8 | 38032567 | 38032612 | E067 | 1222 |
| chr8 | 38042019 | 38042335 | E067 | 10674 |
| chr8 | 38028762 | 38028982 | E068 | 2363 |
| chr8 | 38031365 | 38031456 | E068 | 20 |
| chr8 | 38031488 | 38031552 | E068 | 143 |
| chr8 | 38031672 | 38031847 | E068 | 327 |
| chr8 | 38031945 | 38032004 | E068 | 600 |
| chr8 | 38032035 | 38032081 | E068 | 690 |
| chr8 | 38032143 | 38032202 | E068 | 798 |
| chr8 | 38032465 | 38032522 | E068 | 1120 |
| chr8 | 38032567 | 38032612 | E068 | 1222 |
| chr8 | 38036367 | 38036426 | E068 | 5022 |
| chr8 | 38039721 | 38039906 | E068 | 8376 |
| chr8 | 38039957 | 38040007 | E068 | 8612 |
| chr8 | 38040183 | 38040255 | E068 | 8838 |
| chr8 | 38040805 | 38040871 | E068 | 9460 |
| chr8 | 38040907 | 38041058 | E068 | 9562 |
| chr8 | 38024086 | 38024656 | E069 | 6689 |
| chr8 | 38024728 | 38024778 | E069 | 6567 |
| chr8 | 38024958 | 38025013 | E069 | 6332 |
| chr8 | 38031672 | 38031847 | E069 | 327 |
| chr8 | 38031945 | 38032004 | E069 | 600 |
| chr8 | 38032035 | 38032081 | E069 | 690 |
| chr8 | 38032143 | 38032202 | E069 | 798 |
| chr8 | 38032465 | 38032522 | E069 | 1120 |
| chr8 | 38032567 | 38032612 | E069 | 1222 |
| chr8 | 38036367 | 38036426 | E069 | 5022 |
| chr8 | 38039721 | 38039906 | E069 | 8376 |
| chr8 | 38039957 | 38040007 | E069 | 8612 |
| chr8 | 38040183 | 38040255 | E069 | 8838 |
| chr8 | 38040641 | 38040742 | E069 | 9296 |
| chr8 | 38040805 | 38040871 | E069 | 9460 |
| chr8 | 38040907 | 38041058 | E069 | 9562 |
| chr8 | 38041324 | 38041386 | E069 | 9979 |
| chr8 | 38041479 | 38041554 | E069 | 10134 |
| chr8 | 38041660 | 38041732 | E069 | 10315 |
| chr8 | 38041846 | 38041896 | E069 | 10501 |
| chr8 | 38042019 | 38042335 | E069 | 10674 |
| chr8 | 38061696 | 38061756 | E069 | 30351 |
| chr8 | 38061974 | 38062088 | E069 | 30629 |
| chr8 | 38028762 | 38028982 | E070 | 2363 |
| chr8 | 38030916 | 38031247 | E070 | 98 |
| chr8 | 38031365 | 38031456 | E070 | 20 |
| chr8 | 38031488 | 38031552 | E070 | 143 |
| chr8 | 38031672 | 38031847 | E070 | 327 |
| chr8 | 38031945 | 38032004 | E070 | 600 |
| chr8 | 38032035 | 38032081 | E070 | 690 |
| chr8 | 38032143 | 38032202 | E070 | 798 |
| chr8 | 38036367 | 38036426 | E070 | 5022 |
| chr8 | 38028762 | 38028982 | E071 | 2363 |
| chr8 | 38030916 | 38031247 | E071 | 98 |
| chr8 | 38031365 | 38031456 | E071 | 20 |
| chr8 | 38031488 | 38031552 | E071 | 143 |
| chr8 | 38031672 | 38031847 | E071 | 327 |
| chr8 | 38031945 | 38032004 | E071 | 600 |
| chr8 | 38032035 | 38032081 | E071 | 690 |
| chr8 | 38032143 | 38032202 | E071 | 798 |
| chr8 | 38032465 | 38032522 | E071 | 1120 |
| chr8 | 38032567 | 38032612 | E071 | 1222 |
| chr8 | 38036367 | 38036426 | E071 | 5022 |
| chr8 | 38039721 | 38039906 | E071 | 8376 |
| chr8 | 38039957 | 38040007 | E071 | 8612 |
| chr8 | 38040183 | 38040255 | E071 | 8838 |
| chr8 | 38040641 | 38040742 | E071 | 9296 |
| chr8 | 38040805 | 38040871 | E071 | 9460 |
| chr8 | 38040907 | 38041058 | E071 | 9562 |
| chr8 | 38041324 | 38041386 | E071 | 9979 |
| chr8 | 38041479 | 38041554 | E071 | 10134 |
| chr8 | 38041660 | 38041732 | E071 | 10315 |
| chr8 | 38028762 | 38028982 | E072 | 2363 |
| chr8 | 38039721 | 38039906 | E072 | 8376 |
| chr8 | 38039957 | 38040007 | E072 | 8612 |
| chr8 | 38040183 | 38040255 | E072 | 8838 |
| chr8 | 38040641 | 38040742 | E072 | 9296 |
| chr8 | 38040805 | 38040871 | E072 | 9460 |
| chr8 | 38040907 | 38041058 | E072 | 9562 |
| chr8 | 38041324 | 38041386 | E072 | 9979 |
| chr8 | 38041479 | 38041554 | E072 | 10134 |
| chr8 | 38041660 | 38041732 | E072 | 10315 |
| chr8 | 38041846 | 38041896 | E072 | 10501 |
| chr8 | 38031672 | 38031847 | E073 | 327 |
| chr8 | 38031945 | 38032004 | E073 | 600 |
| chr8 | 38032035 | 38032081 | E073 | 690 |
| chr8 | 38040805 | 38040871 | E073 | 9460 |
| chr8 | 38040907 | 38041058 | E073 | 9562 |
| chr8 | 38042019 | 38042335 | E073 | 10674 |
| chr8 | 38031672 | 38031847 | E074 | 327 |
| chr8 | 38031945 | 38032004 | E074 | 600 |
| chr8 | 38032035 | 38032081 | E074 | 690 |
| chr8 | 38032143 | 38032202 | E074 | 798 |
| chr8 | 38039721 | 38039906 | E074 | 8376 |
| chr8 | 38039957 | 38040007 | E074 | 8612 |
| chr8 | 38040183 | 38040255 | E074 | 8838 |
| chr8 | 38040907 | 38041058 | E074 | 9562 |
| chr8 | 38042019 | 38042335 | E074 | 10674 |
| chr8 | 38061696 | 38061756 | E074 | 30351 |
| chr8 | 38031365 | 38031456 | E081 | 20 |
| chr8 | 38031488 | 38031552 | E081 | 143 |
| chr8 | 38031672 | 38031847 | E081 | 327 |
| chr8 | 38031945 | 38032004 | E081 | 600 |
| chr8 | 38032035 | 38032081 | E081 | 690 |
| chr8 | 38032143 | 38032202 | E081 | 798 |
| chr8 | 38032465 | 38032522 | E081 | 1120 |
| chr8 | 38032567 | 38032612 | E081 | 1222 |
| chr8 | 38032035 | 38032081 | E082 | 690 |
| chr8 | 38032143 | 38032202 | E082 | 798 |
| chr8 | 38036367 | 38036426 | E082 | 5022 |
| chr8 | 38036735 | 38036854 | E082 | 5390 |
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr8 | 38032999 | 38033140 | E067 | 1654 |
| chr8 | 38033208 | 38035695 | E067 | 1863 |
| chr8 | 38035733 | 38035838 | E067 | 4388 |
| chr8 | 38032999 | 38033140 | E068 | 1654 |
| chr8 | 38033208 | 38035695 | E068 | 1863 |
| chr8 | 38035733 | 38035838 | E068 | 4388 |
| chr8 | 38032999 | 38033140 | E069 | 1654 |
| chr8 | 38033208 | 38035695 | E069 | 1863 |
| chr8 | 38035733 | 38035838 | E069 | 4388 |
| chr8 | 38032999 | 38033140 | E070 | 1654 |
| chr8 | 38033208 | 38035695 | E070 | 1863 |
| chr8 | 38035733 | 38035838 | E070 | 4388 |
| chr8 | 38032999 | 38033140 | E071 | 1654 |
| chr8 | 38033208 | 38035695 | E071 | 1863 |
| chr8 | 38035733 | 38035838 | E071 | 4388 |
| chr8 | 38032999 | 38033140 | E072 | 1654 |
| chr8 | 38033208 | 38035695 | E072 | 1863 |
| chr8 | 38035733 | 38035838 | E072 | 4388 |
| chr8 | 38032999 | 38033140 | E073 | 1654 |
| chr8 | 38033208 | 38035695 | E073 | 1863 |
| chr8 | 38035733 | 38035838 | E073 | 4388 |
| chr8 | 38032999 | 38033140 | E074 | 1654 |
| chr8 | 38033208 | 38035695 | E074 | 1863 |
| chr8 | 38033208 | 38035695 | E081 | 1863 |
| chr8 | 38032999 | 38033140 | E082 | 1654 |
| chr8 | 38033208 | 38035695 | E082 | 1863 |
| chr8 | 38035733 | 38035838 | E082 | 4388 |