Search results:
SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Distanceb | Source | eSNP | meSNP | In CNV | In Linkage |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs17083844 | chr18 | 68842243 | G | A | 0.722 | 1.01 | intergenic | GTSCR1, LINC01541, | dist=524150; dist=344957 | CV:PheWAS | N | N | N | N |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr18 | 68804663 | 68804721 | E067 | 37522 |
chr18 | 68857875 | 68857915 | E067 | 15632 |
chr18 | 68803881 | 68803963 | E068 | 38280 |
chr18 | 68850884 | 68850952 | E068 | 8641 |
chr18 | 68856551 | 68856640 | E068 | 14308 |
chr18 | 68888872 | 68888962 | E068 | 46629 |
chr18 | 68803881 | 68803963 | E069 | 38280 |
chr18 | 68804663 | 68804721 | E069 | 37522 |
chr18 | 68888872 | 68888962 | E069 | 46629 |
chr18 | 68803881 | 68803963 | E071 | 38280 |
chr18 | 68804663 | 68804721 | E071 | 37522 |
chr18 | 68856551 | 68856640 | E071 | 14308 |
chr18 | 68803881 | 68803963 | E072 | 38280 |
chr18 | 68804663 | 68804721 | E072 | 37522 |
chr18 | 68856551 | 68856640 | E072 | 14308 |
chr18 | 68888872 | 68888962 | E072 | 46629 |
chr18 | 68804663 | 68804721 | E073 | 37522 |
chr18 | 68803881 | 68803963 | E074 | 38280 |
chr18 | 68804663 | 68804721 | E074 | 37522 |
Promoter annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr18 | 68835610 | 68835821 | E067 | 6422 |
chr18 | 68835825 | 68836538 | E067 | 5705 |
chr18 | 68835610 | 68835821 | E068 | 6422 |
chr18 | 68835825 | 68836538 | E068 | 5705 |
chr18 | 68835610 | 68835821 | E069 | 6422 |
chr18 | 68835610 | 68835821 | E071 | 6422 |
chr18 | 68835825 | 68836538 | E071 | 5705 |
chr18 | 68835610 | 68835821 | E074 | 6422 |
chr18 | 68835825 | 68836538 | E074 | 5705 |