Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs2239547 | chr3 | 52855229 | T | C | 1.441E-6 | 1.059 | intronic | ITIH4, | CV:GWAScat, CV:GWASdb, CV:PGCnp | N | N | N | Y |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr3 | 52865422 | 52865520 | E067 | 10193 |
| chr3 | 52865568 | 52866428 | E067 | 10339 |
| chr3 | 52874989 | 52875062 | E067 | 19760 |
| chr3 | 52875188 | 52875336 | E067 | 19959 |
| chr3 | 52875355 | 52875523 | E067 | 20126 |
| chr3 | 52875736 | 52875897 | E067 | 20507 |
| chr3 | 52878346 | 52878588 | E067 | 23117 |
| chr3 | 52878731 | 52878851 | E067 | 23502 |
| chr3 | 52878948 | 52879045 | E067 | 23719 |
| chr3 | 52879162 | 52879595 | E067 | 23933 |
| chr3 | 52879616 | 52879670 | E067 | 24387 |
| chr3 | 52879699 | 52879752 | E067 | 24470 |
| chr3 | 52879868 | 52879948 | E067 | 24639 |
| chr3 | 52880092 | 52880145 | E067 | 24863 |
| chr3 | 52880225 | 52880309 | E067 | 24996 |
| chr3 | 52885402 | 52885737 | E067 | 30173 |
| chr3 | 52885838 | 52885895 | E067 | 30609 |
| chr3 | 52865422 | 52865520 | E068 | 10193 |
| chr3 | 52875188 | 52875336 | E068 | 19959 |
| chr3 | 52875355 | 52875523 | E068 | 20126 |
| chr3 | 52880092 | 52880145 | E068 | 24863 |
| chr3 | 52865422 | 52865520 | E069 | 10193 |
| chr3 | 52865568 | 52866428 | E069 | 10339 |
| chr3 | 52875736 | 52875897 | E069 | 20507 |
| chr3 | 52878346 | 52878588 | E069 | 23117 |
| chr3 | 52878731 | 52878851 | E069 | 23502 |
| chr3 | 52878948 | 52879045 | E069 | 23719 |
| chr3 | 52879162 | 52879595 | E069 | 23933 |
| chr3 | 52879616 | 52879670 | E069 | 24387 |
| chr3 | 52879699 | 52879752 | E069 | 24470 |
| chr3 | 52879868 | 52879948 | E069 | 24639 |
| chr3 | 52880092 | 52880145 | E069 | 24863 |
| chr3 | 52880225 | 52880309 | E069 | 24996 |
| chr3 | 52880470 | 52880672 | E069 | 25241 |
| chr3 | 52880743 | 52880895 | E069 | 25514 |
| chr3 | 52886541 | 52886715 | E070 | 31312 |
| chr3 | 52886731 | 52886918 | E070 | 31502 |
| chr3 | 52887157 | 52887365 | E070 | 31928 |
| chr3 | 52865568 | 52866428 | E071 | 10339 |
| chr3 | 52866504 | 52866609 | E071 | 11275 |
| chr3 | 52878346 | 52878588 | E071 | 23117 |
| chr3 | 52878731 | 52878851 | E071 | 23502 |
| chr3 | 52878948 | 52879045 | E071 | 23719 |
| chr3 | 52879162 | 52879595 | E071 | 23933 |
| chr3 | 52879616 | 52879670 | E071 | 24387 |
| chr3 | 52879699 | 52879752 | E071 | 24470 |
| chr3 | 52879868 | 52879948 | E071 | 24639 |
| chr3 | 52880092 | 52880145 | E071 | 24863 |
| chr3 | 52880225 | 52880309 | E071 | 24996 |
| chr3 | 52880470 | 52880672 | E071 | 25241 |
| chr3 | 52880743 | 52880895 | E071 | 25514 |
| chr3 | 52864988 | 52865153 | E072 | 9759 |
| chr3 | 52865422 | 52865520 | E072 | 10193 |
| chr3 | 52865568 | 52866428 | E072 | 10339 |
| chr3 | 52875188 | 52875336 | E072 | 19959 |
| chr3 | 52875355 | 52875523 | E072 | 20126 |
| chr3 | 52875736 | 52875897 | E072 | 20507 |
| chr3 | 52876470 | 52876553 | E072 | 21241 |
| chr3 | 52876564 | 52876666 | E072 | 21335 |
| chr3 | 52877141 | 52877444 | E072 | 21912 |
| chr3 | 52878346 | 52878588 | E072 | 23117 |
| chr3 | 52878731 | 52878851 | E072 | 23502 |
| chr3 | 52878948 | 52879045 | E072 | 23719 |
| chr3 | 52879162 | 52879595 | E072 | 23933 |
| chr3 | 52879616 | 52879670 | E072 | 24387 |
| chr3 | 52879699 | 52879752 | E072 | 24470 |
| chr3 | 52879868 | 52879948 | E072 | 24639 |
| chr3 | 52880092 | 52880145 | E072 | 24863 |
| chr3 | 52880225 | 52880309 | E072 | 24996 |
| chr3 | 52880470 | 52880672 | E072 | 25241 |
| chr3 | 52880743 | 52880895 | E072 | 25514 |
| chr3 | 52891999 | 52892215 | E072 | 36770 |
| chr3 | 52834258 | 52834331 | E073 | 20898 |
| chr3 | 52865422 | 52865520 | E073 | 10193 |
| chr3 | 52874989 | 52875062 | E073 | 19760 |
| chr3 | 52875188 | 52875336 | E073 | 19959 |
| chr3 | 52875355 | 52875523 | E073 | 20126 |
| chr3 | 52875736 | 52875897 | E073 | 20507 |
| chr3 | 52876470 | 52876553 | E073 | 21241 |
| chr3 | 52876564 | 52876666 | E073 | 21335 |
| chr3 | 52877026 | 52877083 | E073 | 21797 |
| chr3 | 52877141 | 52877444 | E073 | 21912 |
| chr3 | 52878346 | 52878588 | E073 | 23117 |
| chr3 | 52878731 | 52878851 | E073 | 23502 |
| chr3 | 52878948 | 52879045 | E073 | 23719 |
| chr3 | 52879162 | 52879595 | E073 | 23933 |
| chr3 | 52879616 | 52879670 | E073 | 24387 |
| chr3 | 52879699 | 52879752 | E073 | 24470 |
| chr3 | 52879868 | 52879948 | E073 | 24639 |
| chr3 | 52880092 | 52880145 | E073 | 24863 |
| chr3 | 52880225 | 52880309 | E073 | 24996 |
| chr3 | 52880470 | 52880672 | E073 | 25241 |
| chr3 | 52894608 | 52894658 | E073 | 39379 |
| chr3 | 52900092 | 52900281 | E073 | 44863 |
| chr3 | 52834258 | 52834331 | E074 | 20898 |
| chr3 | 52865422 | 52865520 | E074 | 10193 |
| chr3 | 52865568 | 52866428 | E074 | 10339 |
| chr3 | 52866504 | 52866609 | E074 | 11275 |
| chr3 | 52878346 | 52878588 | E074 | 23117 |
| chr3 | 52878731 | 52878851 | E074 | 23502 |
| chr3 | 52878948 | 52879045 | E074 | 23719 |
| chr3 | 52879162 | 52879595 | E074 | 23933 |
| chr3 | 52879616 | 52879670 | E074 | 24387 |
| chr3 | 52879699 | 52879752 | E074 | 24470 |
| chr3 | 52879868 | 52879948 | E074 | 24639 |
| chr3 | 52880092 | 52880145 | E074 | 24863 |
| chr3 | 52880225 | 52880309 | E074 | 24996 |
| chr3 | 52880470 | 52880672 | E074 | 25241 |
| chr3 | 52891999 | 52892215 | E074 | 36770 |
| chr3 | 52903998 | 52904154 | E074 | 48769 |
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr3 | 52868168 | 52868256 | E067 | 12939 |
| chr3 | 52868405 | 52868498 | E067 | 13176 |
| chr3 | 52868168 | 52868256 | E068 | 12939 |
| chr3 | 52868405 | 52868498 | E068 | 13176 |
| chr3 | 52868168 | 52868256 | E073 | 12939 |
| chr3 | 52868405 | 52868498 | E073 | 13176 |