Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs2276498 | chr20 | 52610496 | C | G | 0.438 | 1.011 | intronic | BCAS1, | CV:GWAScat, CV:GWASdb | N | N | N | N |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr20 | 52565380 | 52566519 | E067 | 43977 |
| chr20 | 52566554 | 52566885 | E067 | 43611 |
| chr20 | 52566993 | 52567033 | E067 | 43463 |
| chr20 | 52578191 | 52578499 | E067 | 31997 |
| chr20 | 52578525 | 52578580 | E067 | 31916 |
| chr20 | 52592772 | 52592844 | E067 | 17652 |
| chr20 | 52592966 | 52593016 | E067 | 17480 |
| chr20 | 52600816 | 52601641 | E067 | 8855 |
| chr20 | 52612472 | 52612980 | E067 | 1976 |
| chr20 | 52613116 | 52613348 | E067 | 2620 |
| chr20 | 52613739 | 52613862 | E067 | 3243 |
| chr20 | 52613887 | 52613947 | E067 | 3391 |
| chr20 | 52613965 | 52614015 | E067 | 3469 |
| chr20 | 52614284 | 52614528 | E067 | 3788 |
| chr20 | 52623496 | 52623557 | E067 | 13000 |
| chr20 | 52623567 | 52623617 | E067 | 13071 |
| chr20 | 52624729 | 52624845 | E067 | 14233 |
| chr20 | 52633467 | 52633593 | E067 | 22971 |
| chr20 | 52633609 | 52633673 | E067 | 23113 |
| chr20 | 52633760 | 52633929 | E067 | 23264 |
| chr20 | 52641304 | 52641354 | E067 | 30808 |
| chr20 | 52577062 | 52577131 | E068 | 33365 |
| chr20 | 52578191 | 52578499 | E068 | 31997 |
| chr20 | 52578525 | 52578580 | E068 | 31916 |
| chr20 | 52600389 | 52600429 | E068 | 10067 |
| chr20 | 52600816 | 52601641 | E068 | 8855 |
| chr20 | 52612472 | 52612980 | E068 | 1976 |
| chr20 | 52613116 | 52613348 | E068 | 2620 |
| chr20 | 52613739 | 52613862 | E068 | 3243 |
| chr20 | 52613887 | 52613947 | E068 | 3391 |
| chr20 | 52613965 | 52614015 | E068 | 3469 |
| chr20 | 52614284 | 52614528 | E068 | 3788 |
| chr20 | 52623567 | 52623617 | E068 | 13071 |
| chr20 | 52624528 | 52624582 | E068 | 14032 |
| chr20 | 52630154 | 52630387 | E068 | 19658 |
| chr20 | 52630673 | 52630739 | E068 | 20177 |
| chr20 | 52630860 | 52631030 | E068 | 20364 |
| chr20 | 52631082 | 52631307 | E068 | 20586 |
| chr20 | 52633086 | 52633140 | E068 | 22590 |
| chr20 | 52633467 | 52633593 | E068 | 22971 |
| chr20 | 52633609 | 52633673 | E068 | 23113 |
| chr20 | 52633760 | 52633929 | E068 | 23264 |
| chr20 | 52638716 | 52638766 | E068 | 28220 |
| chr20 | 52639965 | 52640015 | E068 | 29469 |
| chr20 | 52565380 | 52566519 | E069 | 43977 |
| chr20 | 52566554 | 52566885 | E069 | 43611 |
| chr20 | 52566993 | 52567033 | E069 | 43463 |
| chr20 | 52592772 | 52592844 | E069 | 17652 |
| chr20 | 52592966 | 52593016 | E069 | 17480 |
| chr20 | 52600816 | 52601641 | E069 | 8855 |
| chr20 | 52612472 | 52612980 | E069 | 1976 |
| chr20 | 52613116 | 52613348 | E069 | 2620 |
| chr20 | 52613739 | 52613862 | E069 | 3243 |
| chr20 | 52613887 | 52613947 | E069 | 3391 |
| chr20 | 52613965 | 52614015 | E069 | 3469 |
| chr20 | 52614284 | 52614528 | E069 | 3788 |
| chr20 | 52624528 | 52624582 | E069 | 14032 |
| chr20 | 52624729 | 52624845 | E069 | 14233 |
| chr20 | 52630154 | 52630387 | E069 | 19658 |
| chr20 | 52630673 | 52630739 | E069 | 20177 |
| chr20 | 52633467 | 52633593 | E069 | 22971 |
| chr20 | 52633609 | 52633673 | E069 | 23113 |
| chr20 | 52633760 | 52633929 | E069 | 23264 |
| chr20 | 52638716 | 52638766 | E069 | 28220 |
| chr20 | 52639098 | 52639161 | E069 | 28602 |
| chr20 | 52641304 | 52641354 | E069 | 30808 |
| chr20 | 52641504 | 52642302 | E069 | 31008 |
| chr20 | 52646003 | 52646098 | E069 | 35507 |
| chr20 | 52641504 | 52642302 | E070 | 31008 |
| chr20 | 52565380 | 52566519 | E071 | 43977 |
| chr20 | 52566554 | 52566885 | E071 | 43611 |
| chr20 | 52574795 | 52574870 | E071 | 35626 |
| chr20 | 52574919 | 52574983 | E071 | 35513 |
| chr20 | 52576281 | 52577061 | E071 | 33435 |
| chr20 | 52577062 | 52577131 | E071 | 33365 |
| chr20 | 52577153 | 52577776 | E071 | 32720 |
| chr20 | 52578191 | 52578499 | E071 | 31997 |
| chr20 | 52578525 | 52578580 | E071 | 31916 |
| chr20 | 52592772 | 52592844 | E071 | 17652 |
| chr20 | 52599925 | 52599975 | E071 | 10521 |
| chr20 | 52600816 | 52601641 | E071 | 8855 |
| chr20 | 52612472 | 52612980 | E071 | 1976 |
| chr20 | 52613116 | 52613348 | E071 | 2620 |
| chr20 | 52613739 | 52613862 | E071 | 3243 |
| chr20 | 52613887 | 52613947 | E071 | 3391 |
| chr20 | 52613965 | 52614015 | E071 | 3469 |
| chr20 | 52614284 | 52614528 | E071 | 3788 |
| chr20 | 52623496 | 52623557 | E071 | 13000 |
| chr20 | 52623567 | 52623617 | E071 | 13071 |
| chr20 | 52624528 | 52624582 | E071 | 14032 |
| chr20 | 52624729 | 52624845 | E071 | 14233 |
| chr20 | 52630673 | 52630739 | E071 | 20177 |
| chr20 | 52630860 | 52631030 | E071 | 20364 |
| chr20 | 52631082 | 52631307 | E071 | 20586 |
| chr20 | 52631982 | 52632365 | E071 | 21486 |
| chr20 | 52633086 | 52633140 | E071 | 22590 |
| chr20 | 52633467 | 52633593 | E071 | 22971 |
| chr20 | 52633609 | 52633673 | E071 | 23113 |
| chr20 | 52633760 | 52633929 | E071 | 23264 |
| chr20 | 52634198 | 52634479 | E071 | 23702 |
| chr20 | 52634491 | 52634737 | E071 | 23995 |
| chr20 | 52634860 | 52634992 | E071 | 24364 |
| chr20 | 52637192 | 52637258 | E071 | 26696 |
| chr20 | 52637795 | 52637845 | E071 | 27299 |
| chr20 | 52638139 | 52638300 | E071 | 27643 |
| chr20 | 52638360 | 52638404 | E071 | 27864 |
| chr20 | 52638716 | 52638766 | E071 | 28220 |
| chr20 | 52640131 | 52640251 | E071 | 29635 |
| chr20 | 52641304 | 52641354 | E071 | 30808 |
| chr20 | 52646003 | 52646098 | E071 | 35507 |
| chr20 | 52566554 | 52566885 | E072 | 43611 |
| chr20 | 52592772 | 52592844 | E072 | 17652 |
| chr20 | 52592966 | 52593016 | E072 | 17480 |
| chr20 | 52600816 | 52601641 | E072 | 8855 |
| chr20 | 52606745 | 52606799 | E072 | 3697 |
| chr20 | 52612472 | 52612980 | E072 | 1976 |
| chr20 | 52613116 | 52613348 | E072 | 2620 |
| chr20 | 52613739 | 52613862 | E072 | 3243 |
| chr20 | 52613887 | 52613947 | E072 | 3391 |
| chr20 | 52613965 | 52614015 | E072 | 3469 |
| chr20 | 52614284 | 52614528 | E072 | 3788 |
| chr20 | 52633467 | 52633593 | E072 | 22971 |
| chr20 | 52633609 | 52633673 | E072 | 23113 |
| chr20 | 52633760 | 52633929 | E072 | 23264 |
| chr20 | 52634198 | 52634479 | E072 | 23702 |
| chr20 | 52635265 | 52635443 | E072 | 24769 |
| chr20 | 52635732 | 52635784 | E072 | 25236 |
| chr20 | 52641304 | 52641354 | E072 | 30808 |
| chr20 | 52565380 | 52566519 | E073 | 43977 |
| chr20 | 52576281 | 52577061 | E073 | 33435 |
| chr20 | 52577062 | 52577131 | E073 | 33365 |
| chr20 | 52577153 | 52577776 | E073 | 32720 |
| chr20 | 52641304 | 52641354 | E073 | 30808 |
| chr20 | 52565380 | 52566519 | E074 | 43977 |
| chr20 | 52566554 | 52566885 | E074 | 43611 |
| chr20 | 52574443 | 52574549 | E074 | 35947 |
| chr20 | 52574655 | 52574735 | E074 | 35761 |
| chr20 | 52574741 | 52574781 | E074 | 35715 |
| chr20 | 52574795 | 52574870 | E074 | 35626 |
| chr20 | 52578191 | 52578499 | E074 | 31997 |
| chr20 | 52578525 | 52578580 | E074 | 31916 |
| chr20 | 52592772 | 52592844 | E074 | 17652 |
| chr20 | 52592966 | 52593016 | E074 | 17480 |
| chr20 | 52600816 | 52601641 | E074 | 8855 |
| chr20 | 52612472 | 52612980 | E074 | 1976 |
| chr20 | 52613116 | 52613348 | E074 | 2620 |
| chr20 | 52613739 | 52613862 | E074 | 3243 |
| chr20 | 52613887 | 52613947 | E074 | 3391 |
| chr20 | 52613965 | 52614015 | E074 | 3469 |
| chr20 | 52614284 | 52614528 | E074 | 3788 |
| chr20 | 52623567 | 52623617 | E074 | 13071 |
| chr20 | 52624528 | 52624582 | E074 | 14032 |
| chr20 | 52624729 | 52624845 | E074 | 14233 |
| chr20 | 52630673 | 52630739 | E074 | 20177 |
| chr20 | 52630860 | 52631030 | E074 | 20364 |
| chr20 | 52633467 | 52633593 | E074 | 22971 |
| chr20 | 52633609 | 52633673 | E074 | 23113 |
| chr20 | 52633760 | 52633929 | E074 | 23264 |
| chr20 | 52634198 | 52634479 | E074 | 23702 |
| chr20 | 52634491 | 52634737 | E074 | 23995 |
| chr20 | 52636245 | 52636349 | E074 | 25749 |
| chr20 | 52637192 | 52637258 | E074 | 26696 |
| chr20 | 52637795 | 52637845 | E074 | 27299 |
| chr20 | 52638139 | 52638300 | E074 | 27643 |
| chr20 | 52638360 | 52638404 | E074 | 27864 |
| chr20 | 52638716 | 52638766 | E074 | 28220 |
| chr20 | 52639098 | 52639161 | E074 | 28602 |
| chr20 | 52639965 | 52640015 | E074 | 29469 |
| chr20 | 52640131 | 52640251 | E074 | 29635 |
| chr20 | 52641304 | 52641354 | E074 | 30808 |
| chr20 | 52646003 | 52646098 | E074 | 35507 |
| chr20 | 52641304 | 52641354 | E081 | 30808 |
| chr20 | 52641504 | 52642302 | E081 | 31008 |
| chr20 | 52642348 | 52642442 | E081 | 31852 |
| chr20 | 52659817 | 52660272 | E081 | 49321 |
| chr20 | 52660294 | 52660390 | E081 | 49798 |
| chr20 | 52580180 | 52580654 | E082 | 29842 |
| chr20 | 52580770 | 52580861 | E082 | 29635 |
| chr20 | 52641504 | 52642302 | E082 | 31008 |
| chr20 | 52642348 | 52642442 | E082 | 31852 |
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr20 | 52642457 | 52642555 | E067 | 31961 |
| chr20 | 52642632 | 52642725 | E067 | 32136 |
| chr20 | 52642948 | 52643128 | E067 | 32452 |
| chr20 | 52643133 | 52643193 | E067 | 32637 |
| chr20 | 52643266 | 52643306 | E067 | 32770 |
| chr20 | 52643912 | 52644066 | E067 | 33416 |
| chr20 | 52644768 | 52644868 | E067 | 34272 |
| chr20 | 52645047 | 52645162 | E067 | 34551 |
| chr20 | 52645176 | 52645318 | E067 | 34680 |
| chr20 | 52645364 | 52645673 | E067 | 34868 |
| chr20 | 52645864 | 52645962 | E067 | 35368 |
| chr20 | 52642457 | 52642555 | E068 | 31961 |
| chr20 | 52642632 | 52642725 | E068 | 32136 |
| chr20 | 52642948 | 52643128 | E068 | 32452 |
| chr20 | 52643133 | 52643193 | E068 | 32637 |
| chr20 | 52643266 | 52643306 | E068 | 32770 |
| chr20 | 52643912 | 52644066 | E068 | 33416 |
| chr20 | 52644768 | 52644868 | E068 | 34272 |
| chr20 | 52645047 | 52645162 | E068 | 34551 |
| chr20 | 52645176 | 52645318 | E068 | 34680 |
| chr20 | 52645364 | 52645673 | E068 | 34868 |
| chr20 | 52645864 | 52645962 | E068 | 35368 |
| chr20 | 52642457 | 52642555 | E069 | 31961 |
| chr20 | 52642632 | 52642725 | E069 | 32136 |
| chr20 | 52642948 | 52643128 | E069 | 32452 |
| chr20 | 52643133 | 52643193 | E069 | 32637 |
| chr20 | 52643266 | 52643306 | E069 | 32770 |
| chr20 | 52643912 | 52644066 | E069 | 33416 |
| chr20 | 52644768 | 52644868 | E069 | 34272 |
| chr20 | 52645047 | 52645162 | E069 | 34551 |
| chr20 | 52645176 | 52645318 | E069 | 34680 |
| chr20 | 52645364 | 52645673 | E069 | 34868 |
| chr20 | 52642457 | 52642555 | E071 | 31961 |
| chr20 | 52642632 | 52642725 | E071 | 32136 |
| chr20 | 52642948 | 52643128 | E071 | 32452 |
| chr20 | 52643133 | 52643193 | E071 | 32637 |
| chr20 | 52643266 | 52643306 | E071 | 32770 |
| chr20 | 52643912 | 52644066 | E071 | 33416 |
| chr20 | 52644768 | 52644868 | E071 | 34272 |
| chr20 | 52645047 | 52645162 | E071 | 34551 |
| chr20 | 52645176 | 52645318 | E071 | 34680 |
| chr20 | 52645364 | 52645673 | E071 | 34868 |
| chr20 | 52645864 | 52645962 | E071 | 35368 |
| chr20 | 52642457 | 52642555 | E072 | 31961 |
| chr20 | 52642632 | 52642725 | E072 | 32136 |
| chr20 | 52642948 | 52643128 | E072 | 32452 |
| chr20 | 52643133 | 52643193 | E072 | 32637 |
| chr20 | 52643266 | 52643306 | E072 | 32770 |
| chr20 | 52643912 | 52644066 | E072 | 33416 |
| chr20 | 52644768 | 52644868 | E072 | 34272 |
| chr20 | 52645047 | 52645162 | E072 | 34551 |
| chr20 | 52645176 | 52645318 | E072 | 34680 |
| chr20 | 52645364 | 52645673 | E072 | 34868 |
| chr20 | 52645864 | 52645962 | E072 | 35368 |
| chr20 | 52642457 | 52642555 | E073 | 31961 |
| chr20 | 52642632 | 52642725 | E073 | 32136 |
| chr20 | 52642948 | 52643128 | E073 | 32452 |
| chr20 | 52643133 | 52643193 | E073 | 32637 |
| chr20 | 52643266 | 52643306 | E073 | 32770 |
| chr20 | 52643912 | 52644066 | E073 | 33416 |
| chr20 | 52644768 | 52644868 | E073 | 34272 |
| chr20 | 52645047 | 52645162 | E073 | 34551 |
| chr20 | 52645176 | 52645318 | E073 | 34680 |
| chr20 | 52645364 | 52645673 | E073 | 34868 |
| chr20 | 52642457 | 52642555 | E074 | 31961 |
| chr20 | 52642632 | 52642725 | E074 | 32136 |
| chr20 | 52642948 | 52643128 | E074 | 32452 |
| chr20 | 52643133 | 52643193 | E074 | 32637 |
| chr20 | 52643266 | 52643306 | E074 | 32770 |
| chr20 | 52643912 | 52644066 | E074 | 33416 |
| chr20 | 52644768 | 52644868 | E074 | 34272 |
| chr20 | 52645047 | 52645162 | E074 | 34551 |
| chr20 | 52645176 | 52645318 | E074 | 34680 |
| chr20 | 52645364 | 52645673 | E074 | 34868 |
| chr20 | 52645864 | 52645962 | E074 | 35368 |