Search results:
SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs2799573 | chr10 | 18601928 | T | C | 4.53E-6 | 1.059 | intronic | CACNB2, | CV:GWAScat, CV:GWASdb, CV:PGCnp | N | N | N | Y |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr10 | 18592367 | 18592507 | E068 | 9421 |
chr10 | 18592983 | 18593043 | E068 | 8885 |
chr10 | 18621323 | 18621721 | E068 | 19395 |
chr10 | 18622208 | 18622331 | E068 | 20280 |
chr10 | 18640386 | 18641793 | E068 | 38458 |
chr10 | 18595087 | 18595216 | E069 | 6712 |
chr10 | 18639373 | 18639454 | E070 | 37445 |
chr10 | 18639457 | 18639914 | E070 | 37529 |
chr10 | 18639373 | 18639454 | E072 | 37445 |
chr10 | 18639457 | 18639914 | E072 | 37529 |
chr10 | 18576788 | 18577006 | E073 | 24922 |
chr10 | 18553427 | 18553943 | E081 | 47985 |
chr10 | 18597286 | 18597399 | E081 | 4529 |
chr10 | 18598174 | 18598281 | E081 | 3647 |
chr10 | 18598284 | 18598342 | E081 | 3586 |
chr10 | 18628793 | 18628843 | E081 | 26865 |
chr10 | 18628919 | 18629064 | E081 | 26991 |
chr10 | 18639236 | 18639295 | E082 | 37308 |
chr10 | 18639373 | 18639454 | E082 | 37445 |
chr10 | 18639457 | 18639914 | E082 | 37529 |
chr10 | 18640061 | 18640164 | E082 | 38133 |
chr10 | 18640243 | 18640314 | E082 | 38315 |
Promoter annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr10 | 18629331 | 18630268 | E067 | 27403 |
chr10 | 18629331 | 18630268 | E068 | 27403 |
chr10 | 18629331 | 18630268 | E069 | 27403 |
chr10 | 18630289 | 18630474 | E069 | 28361 |
chr10 | 18629331 | 18630268 | E071 | 27403 |
chr10 | 18629331 | 18630268 | E072 | 27403 |
chr10 | 18630289 | 18630474 | E072 | 28361 |
chr10 | 18629331 | 18630268 | E073 | 27403 |
chr10 | 18630289 | 18630474 | E073 | 28361 |
chr10 | 18629331 | 18630268 | E082 | 27403 |