Search results:
SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs3132581 | chr6 | 30913458 | G | A | -1E0 | -1 | intronic | DPCR1, | CV:GWAScat, CV:GWASdb | Y | N | N | N |
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SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
---|---|---|---|---|---|---|---|---|
rs3132581 | chr6 | 30913457 | HLA-A | 3105 | 9.92965E-2 | cis |
There is no meQTL for this SNP.
Enhancer annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr6 | 30877313 | 30877404 | E067 | 36054 |
chr6 | 30883836 | 30883886 | E067 | 29572 |
chr6 | 30883983 | 30884086 | E067 | 29372 |
chr6 | 30884923 | 30884995 | E067 | 28463 |
chr6 | 30885061 | 30885101 | E067 | 28357 |
chr6 | 30880873 | 30880923 | E068 | 32535 |
chr6 | 30880971 | 30881214 | E068 | 32244 |
chr6 | 30883836 | 30883886 | E068 | 29572 |
chr6 | 30883983 | 30884086 | E069 | 29372 |
chr6 | 30884923 | 30884995 | E069 | 28463 |
chr6 | 30885061 | 30885101 | E069 | 28357 |
chr6 | 30880971 | 30881214 | E070 | 32244 |
chr6 | 30883836 | 30883886 | E070 | 29572 |
chr6 | 30883983 | 30884086 | E070 | 29372 |
chr6 | 30877313 | 30877404 | E071 | 36054 |
chr6 | 30880971 | 30881214 | E071 | 32244 |
chr6 | 30883836 | 30883886 | E071 | 29572 |
chr6 | 30883983 | 30884086 | E071 | 29372 |
chr6 | 30884923 | 30884995 | E071 | 28463 |
chr6 | 30922394 | 30922784 | E071 | 8936 |
chr6 | 30877313 | 30877404 | E072 | 36054 |
chr6 | 30883836 | 30883886 | E072 | 29572 |
chr6 | 30883983 | 30884086 | E072 | 29372 |
chr6 | 30884923 | 30884995 | E072 | 28463 |
chr6 | 30885061 | 30885101 | E072 | 28357 |
chr6 | 30877313 | 30877404 | E073 | 36054 |
chr6 | 30883836 | 30883886 | E073 | 29572 |
chr6 | 30883983 | 30884086 | E073 | 29372 |
chr6 | 30929162 | 30929212 | E073 | 15704 |
chr6 | 30929254 | 30929392 | E073 | 15796 |
chr6 | 30877313 | 30877404 | E074 | 36054 |
chr6 | 30880971 | 30881214 | E074 | 32244 |
chr6 | 30883836 | 30883886 | E074 | 29572 |
chr6 | 30883983 | 30884086 | E074 | 29372 |
chr6 | 30884923 | 30884995 | E074 | 28463 |
chr6 | 30885061 | 30885101 | E074 | 28357 |
chr6 | 30886498 | 30886764 | E074 | 26694 |
chr6 | 30880971 | 30881214 | E081 | 32244 |
chr6 | 30883836 | 30883886 | E081 | 29572 |
chr6 | 30883983 | 30884086 | E081 | 29372 |
chr6 | 30877313 | 30877404 | E082 | 36054 |
chr6 | 30877949 | 30877994 | E082 | 35464 |
chr6 | 30883836 | 30883886 | E082 | 29572 |
chr6 | 30883983 | 30884086 | E082 | 29372 |
Promoter annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr6 | 30875491 | 30876574 | E067 | 36884 |
chr6 | 30923056 | 30924027 | E067 | 9598 |
chr6 | 30875491 | 30876574 | E068 | 36884 |
chr6 | 30923056 | 30924027 | E068 | 9598 |
chr6 | 30875330 | 30875389 | E069 | 38069 |
chr6 | 30875491 | 30876574 | E069 | 36884 |
chr6 | 30875491 | 30876574 | E070 | 36884 |
chr6 | 30875491 | 30876574 | E071 | 36884 |
chr6 | 30923056 | 30924027 | E071 | 9598 |
chr6 | 30875150 | 30875327 | E072 | 38131 |
chr6 | 30875330 | 30875389 | E072 | 38069 |
chr6 | 30875491 | 30876574 | E072 | 36884 |
chr6 | 30923056 | 30924027 | E072 | 9598 |
chr6 | 30875491 | 30876574 | E073 | 36884 |
chr6 | 30923056 | 30924027 | E073 | 9598 |
chr6 | 30875491 | 30876574 | E074 | 36884 |
chr6 | 30919970 | 30920024 | E074 | 6512 |
chr6 | 30923056 | 30924027 | E074 | 9598 |
chr6 | 30875491 | 30876574 | E081 | 36884 |
chr6 | 30875491 | 30876574 | E082 | 36884 |
chr6 | 30923056 | 30924027 | E082 | 9598 |