Search results:
SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Distanceb | Source | eSNP | meSNP | In CNV | In Linkage |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs3758354 | chr9 | 75764565 | A | C | 0.754 | 1.008 | intergenic | ALDH1A1, ANXA1, | dist=196332; dist=2082 | CV:GWAScat, CV:GWASdb | Y | N | N | N |
eQTL annotation | ||||||||
SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
---|---|---|---|---|---|---|---|---|
rs3758354 | chr9 | 75764564 | HSPA6 | 3310 | 1.57977E-1 | trans |
There is no meQTL for this SNP.
Enhancer annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr9 | 75764039 | 75764999 | E067 | 434 |
chr9 | 75764039 | 75764999 | E068 | 434 |
chr9 | 75765033 | 75765254 | E068 | 468 |
chr9 | 75748626 | 75749458 | E070 | 15107 |
chr9 | 75764039 | 75764999 | E071 | 434 |
chr9 | 75765033 | 75765254 | E071 | 468 |
chr9 | 75765415 | 75765527 | E071 | 850 |
chr9 | 75765530 | 75765584 | E071 | 965 |
chr9 | 75765588 | 75765761 | E071 | 1023 |
Promoter annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr9 | 75746351 | 75748358 | E067 | 16207 |
chr9 | 75746351 | 75748358 | E068 | 16207 |
chr9 | 75766419 | 75768292 | E068 | 1854 |
chr9 | 75768337 | 75768441 | E068 | 3772 |
chr9 | 75768450 | 75769531 | E068 | 3885 |
chr9 | 75746351 | 75748358 | E069 | 16207 |
chr9 | 75746351 | 75748358 | E071 | 16207 |
chr9 | 75766419 | 75768292 | E071 | 1854 |
chr9 | 75768337 | 75768441 | E071 | 3772 |
chr9 | 75768450 | 75769531 | E071 | 3885 |
chr9 | 75746351 | 75748358 | E072 | 16207 |