Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Distanceb | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs3800316 | chr6 | 27256102 | A | C | 1.327E-20 | 1.125 | intergenic | PRSS16, POM121L2, | dist=31703; dist=20740 | CV:GWASdb, CV:PGCnp | N | Y | N | N |
There is no eQTL for this SNP.
| meQTL annotation | ||||||||
| SNP ID | Chromosome | Position | CpG | Nearest Gene | pvalue | beta | ||
|---|---|---|---|---|---|---|---|---|
| rs3800316 | chr6 | 27256102 | cg21112168 | POM121L2 | 1.01764E-4 | 4.20501E-3 | ||
There is no enhancer around this SNP.
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr6 | 27218423 | 27218493 | E067 | 37609 |
| chr6 | 27218537 | 27220027 | E067 | 36075 |
| chr6 | 27279893 | 27280931 | E067 | 23791 |
| chr6 | 27300527 | 27301414 | E067 | 44425 |
| chr6 | 27300527 | 27301414 | E068 | 44425 |
| chr6 | 27301468 | 27301698 | E068 | 45366 |
| chr6 | 27218537 | 27220027 | E069 | 36075 |
| chr6 | 27279893 | 27280931 | E069 | 23791 |
| chr6 | 27218537 | 27220027 | E070 | 36075 |
| chr6 | 27279893 | 27280931 | E070 | 23791 |
| chr6 | 27218537 | 27220027 | E071 | 36075 |
| chr6 | 27279893 | 27280931 | E071 | 23791 |
| chr6 | 27300527 | 27301414 | E071 | 44425 |
| chr6 | 27301468 | 27301698 | E071 | 45366 |
| chr6 | 27218423 | 27218493 | E072 | 37609 |
| chr6 | 27218537 | 27220027 | E072 | 36075 |
| chr6 | 27300527 | 27301414 | E072 | 44425 |
| chr6 | 27218423 | 27218493 | E073 | 37609 |
| chr6 | 27218537 | 27220027 | E073 | 36075 |
| chr6 | 27279893 | 27280931 | E073 | 23791 |
| chr6 | 27300527 | 27301414 | E073 | 44425 |
| chr6 | 27218537 | 27220027 | E074 | 36075 |
| chr6 | 27279893 | 27280931 | E074 | 23791 |
| chr6 | 27300527 | 27301414 | E081 | 44425 |
| chr6 | 27218423 | 27218493 | E082 | 37609 |