Search results:
SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Distanceb | Source | eSNP | meSNP | In CNV | In Linkage |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs4309482 | chr18 | 52750469 | A | G | 5.287E-11 | 1.073 | intergenic | CCDC68, LOC101927229, | dist=123730; dist=22666 | CV:GWASdb, CV:PGCnp | N | N | N | Y |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr18 | 52722549 | 52722612 | E068 | 27857 |
chr18 | 52756936 | 52757204 | E069 | 6467 |
chr18 | 52757674 | 52757921 | E069 | 7205 |
chr18 | 52757984 | 52758133 | E069 | 7515 |
chr18 | 52763481 | 52764223 | E069 | 13012 |
chr18 | 52764253 | 52764366 | E069 | 13784 |
chr18 | 52764392 | 52764452 | E069 | 13923 |
chr18 | 52722360 | 52722466 | E070 | 28003 |
chr18 | 52722549 | 52722612 | E070 | 27857 |
chr18 | 52736766 | 52737464 | E070 | 13005 |
chr18 | 52737497 | 52737615 | E070 | 12854 |
chr18 | 52738200 | 52738280 | E070 | 12189 |
chr18 | 52738547 | 52738636 | E070 | 11833 |
chr18 | 52738951 | 52739134 | E070 | 11335 |
chr18 | 52739454 | 52739575 | E070 | 10894 |
chr18 | 52739749 | 52740292 | E070 | 10177 |
chr18 | 52740398 | 52740624 | E070 | 9845 |
chr18 | 52740833 | 52740883 | E070 | 9586 |
chr18 | 52740889 | 52740967 | E070 | 9502 |
chr18 | 52741164 | 52741317 | E070 | 9152 |
chr18 | 52746857 | 52747846 | E070 | 2623 |
chr18 | 52751128 | 52751255 | E070 | 659 |
chr18 | 52751509 | 52751549 | E070 | 1040 |
chr18 | 52752035 | 52752118 | E070 | 1566 |
chr18 | 52752139 | 52752189 | E070 | 1670 |
chr18 | 52752869 | 52752949 | E070 | 2400 |
chr18 | 52752959 | 52753009 | E070 | 2490 |
chr18 | 52754036 | 52754093 | E070 | 3567 |
chr18 | 52754095 | 52754258 | E070 | 3626 |
chr18 | 52754264 | 52754439 | E070 | 3795 |
chr18 | 52757674 | 52757921 | E071 | 7205 |
chr18 | 52757984 | 52758133 | E071 | 7515 |
chr18 | 52758202 | 52758310 | E071 | 7733 |
chr18 | 52722549 | 52722612 | E072 | 27857 |
chr18 | 52757674 | 52757921 | E072 | 7205 |
chr18 | 52757984 | 52758133 | E072 | 7515 |
chr18 | 52758202 | 52758310 | E072 | 7733 |
chr18 | 52722360 | 52722466 | E073 | 28003 |
chr18 | 52722549 | 52722612 | E073 | 27857 |
chr18 | 52746857 | 52747846 | E073 | 2623 |
chr18 | 52756936 | 52757204 | E074 | 6467 |
chr18 | 52757674 | 52757921 | E074 | 7205 |
chr18 | 52757984 | 52758133 | E074 | 7515 |
chr18 | 52758202 | 52758310 | E074 | 7733 |
chr18 | 52719953 | 52720040 | E081 | 30429 |
chr18 | 52720153 | 52720225 | E081 | 30244 |
chr18 | 52722360 | 52722466 | E081 | 28003 |
chr18 | 52722549 | 52722612 | E081 | 27857 |
chr18 | 52722825 | 52722865 | E081 | 27604 |
chr18 | 52723332 | 52723406 | E081 | 27063 |
chr18 | 52723515 | 52723605 | E081 | 26864 |
chr18 | 52723671 | 52723784 | E081 | 26685 |
chr18 | 52737497 | 52737615 | E081 | 12854 |
chr18 | 52738200 | 52738280 | E081 | 12189 |
chr18 | 52738547 | 52738636 | E081 | 11833 |
chr18 | 52738951 | 52739134 | E081 | 11335 |
chr18 | 52739454 | 52739575 | E081 | 10894 |
chr18 | 52739749 | 52740292 | E081 | 10177 |
chr18 | 52740398 | 52740624 | E081 | 9845 |
chr18 | 52740833 | 52740883 | E081 | 9586 |
chr18 | 52740889 | 52740967 | E081 | 9502 |
chr18 | 52741164 | 52741317 | E081 | 9152 |
chr18 | 52746857 | 52747846 | E081 | 2623 |
chr18 | 52747883 | 52747937 | E081 | 2532 |
chr18 | 52748016 | 52748066 | E081 | 2403 |
chr18 | 52748317 | 52748367 | E081 | 2102 |
chr18 | 52755336 | 52755563 | E081 | 4867 |
chr18 | 52756936 | 52757204 | E081 | 6467 |
chr18 | 52757674 | 52757921 | E081 | 7205 |
chr18 | 52757984 | 52758133 | E081 | 7515 |
chr18 | 52758202 | 52758310 | E081 | 7733 |
chr18 | 52765483 | 52765561 | E081 | 15014 |
chr18 | 52795854 | 52796000 | E081 | 45385 |
chr18 | 52700758 | 52700856 | E082 | 49613 |
chr18 | 52719953 | 52720040 | E082 | 30429 |
chr18 | 52720153 | 52720225 | E082 | 30244 |
chr18 | 52722549 | 52722612 | E082 | 27857 |
chr18 | 52722825 | 52722865 | E082 | 27604 |
chr18 | 52723332 | 52723406 | E082 | 27063 |
chr18 | 52736766 | 52737464 | E082 | 13005 |
chr18 | 52737497 | 52737615 | E082 | 12854 |
chr18 | 52738200 | 52738280 | E082 | 12189 |
chr18 | 52738547 | 52738636 | E082 | 11833 |
chr18 | 52738951 | 52739134 | E082 | 11335 |
chr18 | 52739454 | 52739575 | E082 | 10894 |
chr18 | 52739749 | 52740292 | E082 | 10177 |
chr18 | 52740398 | 52740624 | E082 | 9845 |
chr18 | 52746857 | 52747846 | E082 | 2623 |
chr18 | 52747883 | 52747937 | E082 | 2532 |
chr18 | 52748016 | 52748066 | E082 | 2403 |
chr18 | 52748317 | 52748367 | E082 | 2102 |
chr18 | 52795854 | 52796000 | E082 | 45385 |
Promoter annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr18 | 52721281 | 52722300 | E067 | 28169 |
chr18 | 52721281 | 52722300 | E068 | 28169 |
chr18 | 52721281 | 52722300 | E069 | 28169 |
chr18 | 52721281 | 52722300 | E071 | 28169 |
chr18 | 52721281 | 52722300 | E072 | 28169 |
chr18 | 52721281 | 52722300 | E073 | 28169 |
chr18 | 52721281 | 52722300 | E074 | 28169 |
chr18 | 52721281 | 52722300 | E082 | 28169 |