Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs4687552 | chr3 | 52838402 | T | C | 3.918E-8 | 1.063 | intronic | ITIH3, | CV:GWAScat, CV:GWASdb, CV:PGCnp, CV:Ripke_2013 | N | N | N | Y |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr3 | 52803460 | 52803511 | E067 | 34891 |
| chr3 | 52865422 | 52865520 | E067 | 27020 |
| chr3 | 52865568 | 52866428 | E067 | 27166 |
| chr3 | 52874989 | 52875062 | E067 | 36587 |
| chr3 | 52875188 | 52875336 | E067 | 36786 |
| chr3 | 52875355 | 52875523 | E067 | 36953 |
| chr3 | 52875736 | 52875897 | E067 | 37334 |
| chr3 | 52878346 | 52878588 | E067 | 39944 |
| chr3 | 52878731 | 52878851 | E067 | 40329 |
| chr3 | 52878948 | 52879045 | E067 | 40546 |
| chr3 | 52879162 | 52879595 | E067 | 40760 |
| chr3 | 52879616 | 52879670 | E067 | 41214 |
| chr3 | 52879699 | 52879752 | E067 | 41297 |
| chr3 | 52879868 | 52879948 | E067 | 41466 |
| chr3 | 52880092 | 52880145 | E067 | 41690 |
| chr3 | 52880225 | 52880309 | E067 | 41823 |
| chr3 | 52885402 | 52885737 | E067 | 47000 |
| chr3 | 52885838 | 52885895 | E067 | 47436 |
| chr3 | 52803460 | 52803511 | E068 | 34891 |
| chr3 | 52865422 | 52865520 | E068 | 27020 |
| chr3 | 52875188 | 52875336 | E068 | 36786 |
| chr3 | 52875355 | 52875523 | E068 | 36953 |
| chr3 | 52880092 | 52880145 | E068 | 41690 |
| chr3 | 52865422 | 52865520 | E069 | 27020 |
| chr3 | 52865568 | 52866428 | E069 | 27166 |
| chr3 | 52875736 | 52875897 | E069 | 37334 |
| chr3 | 52878346 | 52878588 | E069 | 39944 |
| chr3 | 52878731 | 52878851 | E069 | 40329 |
| chr3 | 52878948 | 52879045 | E069 | 40546 |
| chr3 | 52879162 | 52879595 | E069 | 40760 |
| chr3 | 52879616 | 52879670 | E069 | 41214 |
| chr3 | 52879699 | 52879752 | E069 | 41297 |
| chr3 | 52879868 | 52879948 | E069 | 41466 |
| chr3 | 52880092 | 52880145 | E069 | 41690 |
| chr3 | 52880225 | 52880309 | E069 | 41823 |
| chr3 | 52880470 | 52880672 | E069 | 42068 |
| chr3 | 52880743 | 52880895 | E069 | 42341 |
| chr3 | 52886541 | 52886715 | E070 | 48139 |
| chr3 | 52886731 | 52886918 | E070 | 48329 |
| chr3 | 52887157 | 52887365 | E070 | 48755 |
| chr3 | 52803460 | 52803511 | E071 | 34891 |
| chr3 | 52865568 | 52866428 | E071 | 27166 |
| chr3 | 52866504 | 52866609 | E071 | 28102 |
| chr3 | 52878346 | 52878588 | E071 | 39944 |
| chr3 | 52878731 | 52878851 | E071 | 40329 |
| chr3 | 52878948 | 52879045 | E071 | 40546 |
| chr3 | 52879162 | 52879595 | E071 | 40760 |
| chr3 | 52879616 | 52879670 | E071 | 41214 |
| chr3 | 52879699 | 52879752 | E071 | 41297 |
| chr3 | 52879868 | 52879948 | E071 | 41466 |
| chr3 | 52880092 | 52880145 | E071 | 41690 |
| chr3 | 52880225 | 52880309 | E071 | 41823 |
| chr3 | 52880470 | 52880672 | E071 | 42068 |
| chr3 | 52880743 | 52880895 | E071 | 42341 |
| chr3 | 52864988 | 52865153 | E072 | 26586 |
| chr3 | 52865422 | 52865520 | E072 | 27020 |
| chr3 | 52865568 | 52866428 | E072 | 27166 |
| chr3 | 52875188 | 52875336 | E072 | 36786 |
| chr3 | 52875355 | 52875523 | E072 | 36953 |
| chr3 | 52875736 | 52875897 | E072 | 37334 |
| chr3 | 52876470 | 52876553 | E072 | 38068 |
| chr3 | 52876564 | 52876666 | E072 | 38162 |
| chr3 | 52877141 | 52877444 | E072 | 38739 |
| chr3 | 52878346 | 52878588 | E072 | 39944 |
| chr3 | 52878731 | 52878851 | E072 | 40329 |
| chr3 | 52878948 | 52879045 | E072 | 40546 |
| chr3 | 52879162 | 52879595 | E072 | 40760 |
| chr3 | 52879616 | 52879670 | E072 | 41214 |
| chr3 | 52879699 | 52879752 | E072 | 41297 |
| chr3 | 52879868 | 52879948 | E072 | 41466 |
| chr3 | 52880092 | 52880145 | E072 | 41690 |
| chr3 | 52880225 | 52880309 | E072 | 41823 |
| chr3 | 52880470 | 52880672 | E072 | 42068 |
| chr3 | 52880743 | 52880895 | E072 | 42341 |
| chr3 | 52803460 | 52803511 | E073 | 34891 |
| chr3 | 52834258 | 52834331 | E073 | 4071 |
| chr3 | 52865422 | 52865520 | E073 | 27020 |
| chr3 | 52874989 | 52875062 | E073 | 36587 |
| chr3 | 52875188 | 52875336 | E073 | 36786 |
| chr3 | 52875355 | 52875523 | E073 | 36953 |
| chr3 | 52875736 | 52875897 | E073 | 37334 |
| chr3 | 52876470 | 52876553 | E073 | 38068 |
| chr3 | 52876564 | 52876666 | E073 | 38162 |
| chr3 | 52877026 | 52877083 | E073 | 38624 |
| chr3 | 52877141 | 52877444 | E073 | 38739 |
| chr3 | 52878346 | 52878588 | E073 | 39944 |
| chr3 | 52878731 | 52878851 | E073 | 40329 |
| chr3 | 52878948 | 52879045 | E073 | 40546 |
| chr3 | 52879162 | 52879595 | E073 | 40760 |
| chr3 | 52879616 | 52879670 | E073 | 41214 |
| chr3 | 52879699 | 52879752 | E073 | 41297 |
| chr3 | 52879868 | 52879948 | E073 | 41466 |
| chr3 | 52880092 | 52880145 | E073 | 41690 |
| chr3 | 52880225 | 52880309 | E073 | 41823 |
| chr3 | 52880470 | 52880672 | E073 | 42068 |
| chr3 | 52834258 | 52834331 | E074 | 4071 |
| chr3 | 52865422 | 52865520 | E074 | 27020 |
| chr3 | 52865568 | 52866428 | E074 | 27166 |
| chr3 | 52866504 | 52866609 | E074 | 28102 |
| chr3 | 52878346 | 52878588 | E074 | 39944 |
| chr3 | 52878731 | 52878851 | E074 | 40329 |
| chr3 | 52878948 | 52879045 | E074 | 40546 |
| chr3 | 52879162 | 52879595 | E074 | 40760 |
| chr3 | 52879616 | 52879670 | E074 | 41214 |
| chr3 | 52879699 | 52879752 | E074 | 41297 |
| chr3 | 52879868 | 52879948 | E074 | 41466 |
| chr3 | 52880092 | 52880145 | E074 | 41690 |
| chr3 | 52880225 | 52880309 | E074 | 41823 |
| chr3 | 52880470 | 52880672 | E074 | 42068 |
| chr3 | 52803460 | 52803511 | E081 | 34891 |
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr3 | 52804103 | 52804391 | E067 | 34011 |
| chr3 | 52804488 | 52805587 | E067 | 32815 |
| chr3 | 52868168 | 52868256 | E067 | 29766 |
| chr3 | 52868405 | 52868498 | E067 | 30003 |
| chr3 | 52804103 | 52804391 | E068 | 34011 |
| chr3 | 52804488 | 52805587 | E068 | 32815 |
| chr3 | 52868168 | 52868256 | E068 | 29766 |
| chr3 | 52868405 | 52868498 | E068 | 30003 |
| chr3 | 52804103 | 52804391 | E069 | 34011 |
| chr3 | 52804488 | 52805587 | E069 | 32815 |
| chr3 | 52804103 | 52804391 | E070 | 34011 |
| chr3 | 52804488 | 52805587 | E070 | 32815 |
| chr3 | 52804103 | 52804391 | E071 | 34011 |
| chr3 | 52804488 | 52805587 | E071 | 32815 |
| chr3 | 52804103 | 52804391 | E072 | 34011 |
| chr3 | 52804488 | 52805587 | E072 | 32815 |
| chr3 | 52804103 | 52804391 | E073 | 34011 |
| chr3 | 52804488 | 52805587 | E073 | 32815 |
| chr3 | 52868168 | 52868256 | E073 | 29766 |
| chr3 | 52868405 | 52868498 | E073 | 30003 |
| chr3 | 52804103 | 52804391 | E074 | 34011 |
| chr3 | 52804488 | 52805587 | E074 | 32815 |
| chr3 | 52804103 | 52804391 | E081 | 34011 |
| chr3 | 52804488 | 52805587 | E081 | 32815 |
| chr3 | 52804103 | 52804391 | E082 | 34011 |
| chr3 | 52804488 | 52805587 | E082 | 32815 |