Search results:



SNP ID Chromosome Position A1 A2 Pb Betab Sourced eSNPd In CNV
rs4959235chr63359337CT0.831CV:GWAScatYnull

SNP to gene mapping
SNP IDrs4959235
Functionintronic
GeneSLC22A23
Distance

eQTL annotation
SNP IDChromosomePositioneGeneGene Entrez IDpvalueqvalueTSS distanceeQTL type
rs4959235chr63359336HBD30451.80947E-1trans

There is no enhancer around this SNP.


There is no promoter around this SNP.


Footnote
aGene annotation based on ANNOVAR
GeneResiding gene or upstream/downstream genes
FuncRegion in genes
bInformation in PGC report
p-valueRaw p-value reported in PGC
BETABETA
cRegulomeDB
RDB ScoreSupporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak
1ceQTL + TF binding + matched TF motif + DNase peak
1deQTL + TF binding + any motif + DNase peak
1eeQTL + TF binding + matched TF motif
1feQTL + TF binding / DNase peak
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak
2cTF binding + matched TF motif + DNase peak
3aTF binding + any motif + DNase peak
3bTF binding + matched TF motif
4TF binding + DNase peak
5TF binding or DNase peak
6other
dSNP association with SZ
PGC128Reported among the 128 regions
GWAS_CatCollected in GWAS Catalog as associated with SZ or SZ-related phenotype
PheGWASCollected in PheGWAS as associated with SZ or SZ-related phenotype
GWASdbCollected in GWASdb as associated with SZ or SZ-related phenotype
brain_eQTLReported as eSNP in brain eQTL studies from Myers' work or GTEx


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