Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs6459804 | chr7 | 157510195 | T | C | 0.006 | 1.03 | intronic | PTPRN2, | CV:GWAScat, CV:GWASdb, CV:PGCnp | N | Y | N | N |
There is no eQTL for this SNP.
| meQTL annotation | ||||||||
| SNP ID | Chromosome | Position | CpG | Nearest Gene | pvalue | beta | ||
|---|---|---|---|---|---|---|---|---|
| rs6459804 | chr7 | 157510195 | cg05731713 | PTPRN2 | 4.49E-11 | 7.16901E-3 | ||
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr7 | 157462808 | 157464486 | E068 | 45709 |
| chr7 | 157464542 | 157464616 | E068 | 45579 |
| chr7 | 157465257 | 157465307 | E068 | 44888 |
| chr7 | 157465310 | 157465416 | E068 | 44779 |
| chr7 | 157468333 | 157468383 | E068 | 41812 |
| chr7 | 157468596 | 157468719 | E068 | 41476 |
| chr7 | 157469751 | 157469948 | E068 | 40247 |
| chr7 | 157469976 | 157470080 | E068 | 40115 |
| chr7 | 157470110 | 157470175 | E068 | 40020 |
| chr7 | 157471156 | 157471206 | E068 | 38989 |
| chr7 | 157471244 | 157471448 | E068 | 38747 |
| chr7 | 157471470 | 157471624 | E068 | 38571 |
| chr7 | 157543605 | 157543655 | E068 | 33410 |
| chr7 | 157543852 | 157543943 | E068 | 33657 |
| chr7 | 157460687 | 157460755 | E070 | 49440 |
| chr7 | 157460844 | 157461249 | E070 | 48946 |
| chr7 | 157461361 | 157461499 | E070 | 48696 |
| chr7 | 157461601 | 157461729 | E070 | 48466 |
| chr7 | 157461754 | 157461858 | E070 | 48337 |
| chr7 | 157461902 | 157461973 | E070 | 48222 |
| chr7 | 157462136 | 157462587 | E070 | 47608 |
| chr7 | 157465257 | 157465307 | E070 | 44888 |
| chr7 | 157465310 | 157465416 | E070 | 44779 |
| chr7 | 157468596 | 157468719 | E070 | 41476 |
| chr7 | 157527514 | 157527579 | E070 | 17319 |
| chr7 | 157527801 | 157527891 | E070 | 17606 |
| chr7 | 157528113 | 157528167 | E070 | 17918 |
| chr7 | 157528586 | 157528636 | E070 | 18391 |
| chr7 | 157529002 | 157529078 | E070 | 18807 |
| chr7 | 157530610 | 157531206 | E070 | 20415 |
| chr7 | 157542982 | 157543036 | E070 | 32787 |
| chr7 | 157543303 | 157543393 | E070 | 33108 |
| chr7 | 157543605 | 157543655 | E070 | 33410 |
| chr7 | 157543852 | 157543943 | E070 | 33657 |
| chr7 | 157543985 | 157544177 | E070 | 33790 |
| chr7 | 157544191 | 157544287 | E070 | 33996 |
| chr7 | 157560026 | 157560076 | E070 | 49831 |
| chr7 | 157467739 | 157467789 | E073 | 42406 |
| chr7 | 157468333 | 157468383 | E073 | 41812 |
| chr7 | 157468596 | 157468719 | E073 | 41476 |
| chr7 | 157461754 | 157461858 | E081 | 48337 |
| chr7 | 157461902 | 157461973 | E081 | 48222 |
| chr7 | 157462136 | 157462587 | E081 | 47608 |
| chr7 | 157462808 | 157464486 | E081 | 45709 |
| chr7 | 157472473 | 157472548 | E081 | 37647 |
| chr7 | 157472591 | 157472660 | E081 | 37535 |
| chr7 | 157472850 | 157472896 | E081 | 37299 |
| chr7 | 157514627 | 157514691 | E081 | 4432 |
| chr7 | 157514888 | 157515029 | E081 | 4693 |
| chr7 | 157515075 | 157515160 | E081 | 4880 |
| chr7 | 157515197 | 157515332 | E081 | 5002 |
| chr7 | 157515659 | 157515889 | E081 | 5464 |
| chr7 | 157515909 | 157515953 | E081 | 5714 |
| chr7 | 157516027 | 157516107 | E081 | 5832 |
| chr7 | 157516391 | 157516583 | E081 | 6196 |
| chr7 | 157543605 | 157543655 | E081 | 33410 |
| chr7 | 157543852 | 157543943 | E081 | 33657 |
| chr7 | 157543985 | 157544177 | E081 | 33790 |
| chr7 | 157544191 | 157544287 | E081 | 33996 |
| chr7 | 157544322 | 157544470 | E081 | 34127 |
| chr7 | 157544771 | 157544821 | E081 | 34576 |
| chr7 | 157551020 | 157551081 | E081 | 40825 |
| chr7 | 157551090 | 157551170 | E081 | 40895 |
| chr7 | 157514888 | 157515029 | E082 | 4693 |
| chr7 | 157515075 | 157515160 | E082 | 4880 |
| chr7 | 157515197 | 157515332 | E082 | 5002 |
| chr7 | 157515659 | 157515889 | E082 | 5464 |
| chr7 | 157515909 | 157515953 | E082 | 5714 |
| chr7 | 157516027 | 157516107 | E082 | 5832 |
| chr7 | 157516391 | 157516583 | E082 | 6196 |
| chr7 | 157530610 | 157531206 | E082 | 20415 |
| chr7 | 157531254 | 157531304 | E082 | 21059 |
| chr7 | 157543985 | 157544177 | E082 | 33790 |
| chr7 | 157544191 | 157544287 | E082 | 33996 |
| chr7 | 157559308 | 157559381 | E082 | 49113 |
| chr7 | 157560026 | 157560076 | E082 | 49831 |
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr7 | 157482817 | 157482996 | E067 | 27199 |
| chr7 | 157483011 | 157484953 | E067 | 25242 |
| chr7 | 157482817 | 157482996 | E068 | 27199 |
| chr7 | 157483011 | 157484953 | E068 | 25242 |
| chr7 | 157483011 | 157484953 | E069 | 25242 |
| chr7 | 157477314 | 157477452 | E070 | 32743 |
| chr7 | 157477481 | 157478076 | E070 | 32119 |
| chr7 | 157482817 | 157482996 | E070 | 27199 |
| chr7 | 157483011 | 157484953 | E070 | 25242 |
| chr7 | 157483011 | 157484953 | E071 | 25242 |
| chr7 | 157483011 | 157484953 | E072 | 25242 |
| chr7 | 157482817 | 157482996 | E073 | 27199 |
| chr7 | 157483011 | 157484953 | E073 | 25242 |
| chr7 | 157482817 | 157482996 | E074 | 27199 |
| chr7 | 157483011 | 157484953 | E074 | 25242 |
| chr7 | 157477314 | 157477452 | E082 | 32743 |
| chr7 | 157477481 | 157478076 | E082 | 32119 |