Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs6868517 | chr5 | 40752536 | 0 | 0 | 0.553 | 0.993 | intronic | TTC33, | CV:GWASdb | N | Y | N | N |
There is no eQTL for this SNP.
| meQTL annotation | ||||||||
| SNP ID | Chromosome | Position | CpG | Nearest Gene | pvalue | beta | ||
|---|---|---|---|---|---|---|---|---|
| rs6868517 | chr5 | 40752536 | cg13700051 | TTC33 | 3.55E-7 | 1.39449E-2 | ||
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr5 | 40716239 | 40716368 | E067 | 36168 |
| chr5 | 40733653 | 40734994 | E067 | 17542 |
| chr5 | 40734995 | 40735652 | E067 | 16884 |
| chr5 | 40735865 | 40735915 | E067 | 16621 |
| chr5 | 40736023 | 40736085 | E067 | 16451 |
| chr5 | 40736234 | 40736304 | E067 | 16232 |
| chr5 | 40791420 | 40791567 | E067 | 38884 |
| chr5 | 40791589 | 40791781 | E067 | 39053 |
| chr5 | 40791844 | 40792221 | E067 | 39308 |
| chr5 | 40799554 | 40799643 | E067 | 47018 |
| chr5 | 40800151 | 40800246 | E067 | 47615 |
| chr5 | 40733653 | 40734994 | E068 | 17542 |
| chr5 | 40735865 | 40735915 | E068 | 16621 |
| chr5 | 40736023 | 40736085 | E068 | 16451 |
| chr5 | 40736234 | 40736304 | E068 | 16232 |
| chr5 | 40736346 | 40736687 | E068 | 15849 |
| chr5 | 40754190 | 40754574 | E068 | 1654 |
| chr5 | 40717471 | 40717658 | E069 | 34878 |
| chr5 | 40717714 | 40717801 | E069 | 34735 |
| chr5 | 40733653 | 40734994 | E069 | 17542 |
| chr5 | 40734995 | 40735652 | E069 | 16884 |
| chr5 | 40735865 | 40735915 | E069 | 16621 |
| chr5 | 40736023 | 40736085 | E069 | 16451 |
| chr5 | 40736234 | 40736304 | E069 | 16232 |
| chr5 | 40736346 | 40736687 | E069 | 15849 |
| chr5 | 40754190 | 40754574 | E069 | 1654 |
| chr5 | 40782050 | 40782265 | E069 | 29514 |
| chr5 | 40799554 | 40799643 | E069 | 47018 |
| chr5 | 40782050 | 40782265 | E070 | 29514 |
| chr5 | 40799554 | 40799643 | E070 | 47018 |
| chr5 | 40714191 | 40714241 | E071 | 38295 |
| chr5 | 40733653 | 40734994 | E071 | 17542 |
| chr5 | 40734995 | 40735652 | E071 | 16884 |
| chr5 | 40735865 | 40735915 | E071 | 16621 |
| chr5 | 40736023 | 40736085 | E071 | 16451 |
| chr5 | 40736234 | 40736304 | E071 | 16232 |
| chr5 | 40736346 | 40736687 | E071 | 15849 |
| chr5 | 40743297 | 40743415 | E071 | 9121 |
| chr5 | 40743855 | 40744243 | E071 | 8293 |
| chr5 | 40754190 | 40754574 | E071 | 1654 |
| chr5 | 40776190 | 40776443 | E071 | 23654 |
| chr5 | 40782050 | 40782265 | E071 | 29514 |
| chr5 | 40791420 | 40791567 | E071 | 38884 |
| chr5 | 40791589 | 40791781 | E071 | 39053 |
| chr5 | 40716239 | 40716368 | E072 | 36168 |
| chr5 | 40717471 | 40717658 | E072 | 34878 |
| chr5 | 40733653 | 40734994 | E072 | 17542 |
| chr5 | 40734995 | 40735652 | E072 | 16884 |
| chr5 | 40735865 | 40735915 | E072 | 16621 |
| chr5 | 40736023 | 40736085 | E072 | 16451 |
| chr5 | 40736234 | 40736304 | E072 | 16232 |
| chr5 | 40736346 | 40736687 | E072 | 15849 |
| chr5 | 40743297 | 40743415 | E072 | 9121 |
| chr5 | 40754190 | 40754574 | E072 | 1654 |
| chr5 | 40733653 | 40734994 | E073 | 17542 |
| chr5 | 40735865 | 40735915 | E073 | 16621 |
| chr5 | 40736023 | 40736085 | E073 | 16451 |
| chr5 | 40754190 | 40754574 | E073 | 1654 |
| chr5 | 40799554 | 40799643 | E073 | 47018 |
| chr5 | 40713520 | 40713640 | E074 | 38896 |
| chr5 | 40713700 | 40713760 | E074 | 38776 |
| chr5 | 40714191 | 40714241 | E074 | 38295 |
| chr5 | 40716239 | 40716368 | E074 | 36168 |
| chr5 | 40717471 | 40717658 | E074 | 34878 |
| chr5 | 40717714 | 40717801 | E074 | 34735 |
| chr5 | 40733653 | 40734994 | E074 | 17542 |
| chr5 | 40734995 | 40735652 | E074 | 16884 |
| chr5 | 40735865 | 40735915 | E074 | 16621 |
| chr5 | 40736023 | 40736085 | E074 | 16451 |
| chr5 | 40736234 | 40736304 | E074 | 16232 |
| chr5 | 40736346 | 40736687 | E074 | 15849 |
| chr5 | 40754190 | 40754574 | E074 | 1654 |
| chr5 | 40782050 | 40782265 | E074 | 29514 |
| chr5 | 40799554 | 40799643 | E074 | 47018 |
| chr5 | 40799554 | 40799643 | E082 | 47018 |
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr5 | 40754585 | 40756698 | E067 | 2049 |
| chr5 | 40797119 | 40799252 | E067 | 44583 |
| chr5 | 40754585 | 40756698 | E068 | 2049 |
| chr5 | 40797119 | 40799252 | E068 | 44583 |
| chr5 | 40754585 | 40756698 | E069 | 2049 |
| chr5 | 40797119 | 40799252 | E069 | 44583 |
| chr5 | 40754585 | 40756698 | E070 | 2049 |
| chr5 | 40797119 | 40799252 | E070 | 44583 |
| chr5 | 40754585 | 40756698 | E071 | 2049 |
| chr5 | 40797119 | 40799252 | E071 | 44583 |
| chr5 | 40754585 | 40756698 | E072 | 2049 |
| chr5 | 40797119 | 40799252 | E072 | 44583 |
| chr5 | 40754585 | 40756698 | E073 | 2049 |
| chr5 | 40797119 | 40799252 | E073 | 44583 |
| chr5 | 40754585 | 40756698 | E074 | 2049 |
| chr5 | 40797119 | 40799252 | E074 | 44583 |
| chr5 | 40754585 | 40756698 | E081 | 2049 |
| chr5 | 40797119 | 40799252 | E081 | 44583 |
| chr5 | 40754585 | 40756698 | E082 | 2049 |
| chr5 | 40797119 | 40799252 | E082 | 44583 |