Search results:
SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Distanceb | Source | eSNP | meSNP | In CNV | In Linkage |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs6932590 | chr6 | 27248931 | T | C | 1.017E-20 | 1.129 | intergenic | PRSS16, POM121L2, | dist=24532; dist=27911 | CV:GWAScat, CV:GWASdb, CV:PGCnp | N | Y | N | N |
There is no eQTL for this SNP.
meQTL annotation | ||||||||
SNP ID | Chromosome | Position | CpG | Nearest Gene | pvalue | beta | ||
---|---|---|---|---|---|---|---|---|
rs6932590 | chr6 | 27248931 | cg14472384 | POM121L2 | 4.5815E-4 | 5.83702E-3 |
There is no enhancer around this SNP.
Promoter annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr6 | 27218423 | 27218493 | E067 | 30438 |
chr6 | 27218537 | 27220027 | E067 | 28904 |
chr6 | 27279893 | 27280931 | E067 | 30962 |
chr6 | 27218537 | 27220027 | E069 | 28904 |
chr6 | 27279893 | 27280931 | E069 | 30962 |
chr6 | 27218537 | 27220027 | E070 | 28904 |
chr6 | 27279893 | 27280931 | E070 | 30962 |
chr6 | 27218537 | 27220027 | E071 | 28904 |
chr6 | 27279893 | 27280931 | E071 | 30962 |
chr6 | 27218423 | 27218493 | E072 | 30438 |
chr6 | 27218537 | 27220027 | E072 | 28904 |
chr6 | 27218423 | 27218493 | E073 | 30438 |
chr6 | 27218537 | 27220027 | E073 | 28904 |
chr6 | 27279893 | 27280931 | E073 | 30962 |
chr6 | 27218537 | 27220027 | E074 | 28904 |
chr6 | 27279893 | 27280931 | E074 | 30962 |
chr6 | 27218423 | 27218493 | E082 | 30438 |