Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Distanceb | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs72934570 | chr18 | 53533189 | T | C | 3.667E-12 | 0.865 | intergenic | TCF4, LINC01416, | dist=229965; dist=15730 | CV:GWAScat, CV:PGC128, CV:PGCnp | N | N | N | N |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr18 | 53527457 | 53527604 | E067 | 5585 |
| chr18 | 53527787 | 53527986 | E067 | 5203 |
| chr18 | 53528306 | 53528405 | E067 | 4784 |
| chr18 | 53528480 | 53529144 | E067 | 4045 |
| chr18 | 53542375 | 53542425 | E067 | 9186 |
| chr18 | 53543465 | 53543515 | E067 | 10276 |
| chr18 | 53543614 | 53543733 | E067 | 10425 |
| chr18 | 53543899 | 53543959 | E067 | 10710 |
| chr18 | 53544135 | 53544185 | E067 | 10946 |
| chr18 | 53575914 | 53576583 | E067 | 42725 |
| chr18 | 53531073 | 53531520 | E068 | 1669 |
| chr18 | 53543465 | 53543515 | E068 | 10276 |
| chr18 | 53543614 | 53543733 | E068 | 10425 |
| chr18 | 53543899 | 53543959 | E068 | 10710 |
| chr18 | 53575616 | 53575687 | E068 | 42427 |
| chr18 | 53578806 | 53578856 | E068 | 45617 |
| chr18 | 53579325 | 53579414 | E068 | 46136 |
| chr18 | 53579423 | 53579493 | E068 | 46234 |
| chr18 | 53579533 | 53580385 | E068 | 46344 |
| chr18 | 53527457 | 53527604 | E069 | 5585 |
| chr18 | 53527787 | 53527986 | E069 | 5203 |
| chr18 | 53531073 | 53531520 | E069 | 1669 |
| chr18 | 53542375 | 53542425 | E069 | 9186 |
| chr18 | 53543465 | 53543515 | E069 | 10276 |
| chr18 | 53543614 | 53543733 | E069 | 10425 |
| chr18 | 53543899 | 53543959 | E069 | 10710 |
| chr18 | 53574412 | 53575529 | E069 | 41223 |
| chr18 | 53575914 | 53576583 | E069 | 42725 |
| chr18 | 53579325 | 53579414 | E069 | 46136 |
| chr18 | 53579533 | 53580385 | E069 | 46344 |
| chr18 | 53511698 | 53511927 | E070 | 21262 |
| chr18 | 53511947 | 53512008 | E070 | 21181 |
| chr18 | 53512199 | 53512249 | E070 | 20940 |
| chr18 | 53524693 | 53524945 | E070 | 8244 |
| chr18 | 53525106 | 53525210 | E070 | 7979 |
| chr18 | 53527457 | 53527604 | E070 | 5585 |
| chr18 | 53527787 | 53527986 | E070 | 5203 |
| chr18 | 53528306 | 53528405 | E070 | 4784 |
| chr18 | 53528480 | 53529144 | E070 | 4045 |
| chr18 | 53530069 | 53530195 | E070 | 2994 |
| chr18 | 53531073 | 53531520 | E070 | 1669 |
| chr18 | 53531624 | 53531888 | E070 | 1301 |
| chr18 | 53531933 | 53532028 | E070 | 1161 |
| chr18 | 53532252 | 53532348 | E070 | 841 |
| chr18 | 53534619 | 53534693 | E070 | 1430 |
| chr18 | 53534734 | 53534856 | E070 | 1545 |
| chr18 | 53542375 | 53542425 | E070 | 9186 |
| chr18 | 53542461 | 53543193 | E070 | 9272 |
| chr18 | 53566498 | 53566548 | E070 | 33309 |
| chr18 | 53566756 | 53566816 | E070 | 33567 |
| chr18 | 53567045 | 53567165 | E070 | 33856 |
| chr18 | 53567218 | 53567318 | E070 | 34029 |
| chr18 | 53567462 | 53567512 | E070 | 34273 |
| chr18 | 53567769 | 53567891 | E070 | 34580 |
| chr18 | 53575616 | 53575687 | E070 | 42427 |
| chr18 | 53575914 | 53576583 | E070 | 42725 |
| chr18 | 53488302 | 53489023 | E071 | 44166 |
| chr18 | 53525106 | 53525210 | E071 | 7979 |
| chr18 | 53525289 | 53525468 | E071 | 7721 |
| chr18 | 53527457 | 53527604 | E071 | 5585 |
| chr18 | 53528480 | 53529144 | E071 | 4045 |
| chr18 | 53531073 | 53531520 | E071 | 1669 |
| chr18 | 53542146 | 53542196 | E071 | 8957 |
| chr18 | 53574412 | 53575529 | E071 | 41223 |
| chr18 | 53575616 | 53575687 | E071 | 42427 |
| chr18 | 53575914 | 53576583 | E071 | 42725 |
| chr18 | 53579533 | 53580385 | E071 | 46344 |
| chr18 | 53528480 | 53529144 | E072 | 4045 |
| chr18 | 53531073 | 53531520 | E072 | 1669 |
| chr18 | 53543465 | 53543515 | E072 | 10276 |
| chr18 | 53543614 | 53543733 | E072 | 10425 |
| chr18 | 53574412 | 53575529 | E072 | 41223 |
| chr18 | 53575616 | 53575687 | E072 | 42427 |
| chr18 | 53575914 | 53576583 | E072 | 42725 |
| chr18 | 53579325 | 53579414 | E072 | 46136 |
| chr18 | 53579423 | 53579493 | E072 | 46234 |
| chr18 | 53579533 | 53580385 | E072 | 46344 |
| chr18 | 53525106 | 53525210 | E073 | 7979 |
| chr18 | 53525289 | 53525468 | E073 | 7721 |
| chr18 | 53531073 | 53531520 | E073 | 1669 |
| chr18 | 53527457 | 53527604 | E074 | 5585 |
| chr18 | 53527787 | 53527986 | E074 | 5203 |
| chr18 | 53531073 | 53531520 | E074 | 1669 |
| chr18 | 53542146 | 53542196 | E074 | 8957 |
| chr18 | 53542375 | 53542425 | E074 | 9186 |
| chr18 | 53574412 | 53575529 | E074 | 41223 |
| chr18 | 53579533 | 53580385 | E074 | 46344 |
| chr18 | 53497866 | 53498298 | E081 | 34891 |
| chr18 | 53498916 | 53499253 | E081 | 33936 |
| chr18 | 53527457 | 53527604 | E081 | 5585 |
| chr18 | 53527787 | 53527986 | E081 | 5203 |
| chr18 | 53530243 | 53530952 | E081 | 2237 |
| chr18 | 53531073 | 53531520 | E081 | 1669 |
| chr18 | 53532252 | 53532348 | E081 | 841 |
| chr18 | 53486110 | 53486231 | E082 | 46958 |
| chr18 | 53486285 | 53486369 | E082 | 46820 |
| chr18 | 53528306 | 53528405 | E082 | 4784 |
| chr18 | 53528480 | 53529144 | E082 | 4045 |
| chr18 | 53530069 | 53530195 | E082 | 2994 |
| chr18 | 53530243 | 53530952 | E082 | 2237 |
| chr18 | 53531073 | 53531520 | E082 | 1669 |
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr18 | 53525544 | 53525745 | E067 | 7444 |
| chr18 | 53525788 | 53526651 | E067 | 6538 |
| chr18 | 53525544 | 53525745 | E068 | 7444 |
| chr18 | 53525788 | 53526651 | E068 | 6538 |
| chr18 | 53525544 | 53525745 | E069 | 7444 |
| chr18 | 53525788 | 53526651 | E069 | 6538 |
| chr18 | 53525544 | 53525745 | E070 | 7444 |
| chr18 | 53525788 | 53526651 | E070 | 6538 |
| chr18 | 53525544 | 53525745 | E071 | 7444 |
| chr18 | 53525788 | 53526651 | E071 | 6538 |
| chr18 | 53525544 | 53525745 | E072 | 7444 |
| chr18 | 53525788 | 53526651 | E072 | 6538 |
| chr18 | 53525544 | 53525745 | E073 | 7444 |
| chr18 | 53525788 | 53526651 | E073 | 6538 |
| chr18 | 53525544 | 53525745 | E074 | 7444 |
| chr18 | 53525788 | 53526651 | E074 | 6538 |
| chr18 | 53525788 | 53526651 | E081 | 6538 |