Search results:
SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs7432375 | chr3 | 136288405 | A | G | 5.274E-11 | 0.931 | intronic | STAG1, | CV:GWAScat, CV:PGC128, CV:PGCnp | Y | N | N | N |
eQTL annotation | ||||||||
SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
---|---|---|---|---|---|---|---|---|
rs7432375 | 3 | 136288405 | RP11-102M11.2 | ENSG00000261758.1 | 5.47507E-6 | 5.33642E-3 | -183067 | gtex_brain_putamen_basal |
There is no meQTL for this SNP.
Enhancer annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr3 | 136264629 | 136264858 | E068 | 23547 |
chr3 | 136264979 | 136265074 | E068 | 23331 |
chr3 | 136314746 | 136314895 | E068 | 26341 |
chr3 | 136314926 | 136315050 | E068 | 26521 |
chr3 | 136315073 | 136315232 | E068 | 26668 |
chr3 | 136315333 | 136315373 | E068 | 26928 |
chr3 | 136264629 | 136264858 | E071 | 23547 |
chr3 | 136264979 | 136265074 | E071 | 23331 |
chr3 | 136315073 | 136315232 | E072 | 26668 |
chr3 | 136264629 | 136264858 | E074 | 23547 |
chr3 | 136264979 | 136265074 | E074 | 23331 |
chr3 | 136278603 | 136278661 | E074 | 9744 |