Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs778371 | chr2 | 233743109 | A | G | 5.168E-12 | 0.922 | downstream | NGEF, | CV:GWAScat, CV:GWASdb, CV:PGCnp, CV:Ripke_2013 | N | N | N | Y |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr2 | 233700383 | 233700607 | E067 | 42502 |
| chr2 | 233700723 | 233700792 | E067 | 42317 |
| chr2 | 233703137 | 233703679 | E067 | 39430 |
| chr2 | 233704049 | 233704409 | E067 | 38700 |
| chr2 | 233704448 | 233704757 | E067 | 38352 |
| chr2 | 233736314 | 233736456 | E067 | 6653 |
| chr2 | 233736777 | 233736885 | E067 | 6224 |
| chr2 | 233737006 | 233737148 | E067 | 5961 |
| chr2 | 233737676 | 233737833 | E067 | 5276 |
| chr2 | 233738838 | 233739208 | E067 | 3901 |
| chr2 | 233742559 | 233742609 | E067 | 500 |
| chr2 | 233742702 | 233742768 | E067 | 341 |
| chr2 | 233743698 | 233743778 | E067 | 589 |
| chr2 | 233744953 | 233745003 | E067 | 1844 |
| chr2 | 233755584 | 233756215 | E067 | 12475 |
| chr2 | 233756362 | 233756537 | E067 | 13253 |
| chr2 | 233789291 | 233789371 | E067 | 46182 |
| chr2 | 233698362 | 233698412 | E068 | 44697 |
| chr2 | 233698614 | 233698928 | E068 | 44181 |
| chr2 | 233703137 | 233703679 | E068 | 39430 |
| chr2 | 233704049 | 233704409 | E068 | 38700 |
| chr2 | 233704448 | 233704757 | E068 | 38352 |
| chr2 | 233718246 | 233718359 | E068 | 24750 |
| chr2 | 233734074 | 233734230 | E068 | 8879 |
| chr2 | 233734303 | 233734356 | E068 | 8753 |
| chr2 | 233734485 | 233734659 | E068 | 8450 |
| chr2 | 233734687 | 233734738 | E068 | 8371 |
| chr2 | 233736314 | 233736456 | E068 | 6653 |
| chr2 | 233736777 | 233736885 | E068 | 6224 |
| chr2 | 233737006 | 233737148 | E068 | 5961 |
| chr2 | 233737676 | 233737833 | E068 | 5276 |
| chr2 | 233738838 | 233739208 | E068 | 3901 |
| chr2 | 233743698 | 233743778 | E068 | 589 |
| chr2 | 233744953 | 233745003 | E068 | 1844 |
| chr2 | 233748967 | 233749056 | E068 | 5858 |
| chr2 | 233749136 | 233749228 | E068 | 6027 |
| chr2 | 233749355 | 233749405 | E068 | 6246 |
| chr2 | 233751764 | 233751815 | E068 | 8655 |
| chr2 | 233751913 | 233752196 | E068 | 8804 |
| chr2 | 233755584 | 233756215 | E068 | 12475 |
| chr2 | 233756362 | 233756537 | E068 | 13253 |
| chr2 | 233766451 | 233766678 | E068 | 23342 |
| chr2 | 233766754 | 233766971 | E068 | 23645 |
| chr2 | 233700383 | 233700607 | E069 | 42502 |
| chr2 | 233700723 | 233700792 | E069 | 42317 |
| chr2 | 233703137 | 233703679 | E069 | 39430 |
| chr2 | 233704049 | 233704409 | E069 | 38700 |
| chr2 | 233704448 | 233704757 | E069 | 38352 |
| chr2 | 233718246 | 233718359 | E069 | 24750 |
| chr2 | 233734485 | 233734659 | E069 | 8450 |
| chr2 | 233734687 | 233734738 | E069 | 8371 |
| chr2 | 233736314 | 233736456 | E069 | 6653 |
| chr2 | 233736777 | 233736885 | E069 | 6224 |
| chr2 | 233737006 | 233737148 | E069 | 5961 |
| chr2 | 233737676 | 233737833 | E069 | 5276 |
| chr2 | 233738838 | 233739208 | E069 | 3901 |
| chr2 | 233739244 | 233739327 | E069 | 3782 |
| chr2 | 233739517 | 233739582 | E069 | 3527 |
| chr2 | 233742559 | 233742609 | E069 | 500 |
| chr2 | 233742702 | 233742768 | E069 | 341 |
| chr2 | 233743698 | 233743778 | E069 | 589 |
| chr2 | 233744953 | 233745003 | E069 | 1844 |
| chr2 | 233755584 | 233756215 | E069 | 12475 |
| chr2 | 233756362 | 233756537 | E069 | 13253 |
| chr2 | 233763506 | 233763560 | E069 | 20397 |
| chr2 | 233766105 | 233766326 | E069 | 22996 |
| chr2 | 233766451 | 233766678 | E069 | 23342 |
| chr2 | 233737676 | 233737833 | E070 | 5276 |
| chr2 | 233755584 | 233756215 | E070 | 12475 |
| chr2 | 233765983 | 233766078 | E070 | 22874 |
| chr2 | 233698362 | 233698412 | E071 | 44697 |
| chr2 | 233698614 | 233698928 | E071 | 44181 |
| chr2 | 233700383 | 233700607 | E071 | 42502 |
| chr2 | 233700723 | 233700792 | E071 | 42317 |
| chr2 | 233703137 | 233703679 | E071 | 39430 |
| chr2 | 233704049 | 233704409 | E071 | 38700 |
| chr2 | 233704448 | 233704757 | E071 | 38352 |
| chr2 | 233720012 | 233720075 | E071 | 23034 |
| chr2 | 233734485 | 233734659 | E071 | 8450 |
| chr2 | 233734687 | 233734738 | E071 | 8371 |
| chr2 | 233736777 | 233736885 | E071 | 6224 |
| chr2 | 233737006 | 233737148 | E071 | 5961 |
| chr2 | 233737676 | 233737833 | E071 | 5276 |
| chr2 | 233738838 | 233739208 | E071 | 3901 |
| chr2 | 233739244 | 233739327 | E071 | 3782 |
| chr2 | 233739517 | 233739582 | E071 | 3527 |
| chr2 | 233755584 | 233756215 | E071 | 12475 |
| chr2 | 233756362 | 233756537 | E071 | 13253 |
| chr2 | 233704049 | 233704409 | E072 | 38700 |
| chr2 | 233704448 | 233704757 | E072 | 38352 |
| chr2 | 233734485 | 233734659 | E072 | 8450 |
| chr2 | 233734687 | 233734738 | E072 | 8371 |
| chr2 | 233736314 | 233736456 | E072 | 6653 |
| chr2 | 233736777 | 233736885 | E072 | 6224 |
| chr2 | 233737006 | 233737148 | E072 | 5961 |
| chr2 | 233737676 | 233737833 | E072 | 5276 |
| chr2 | 233738838 | 233739208 | E072 | 3901 |
| chr2 | 233739244 | 233739327 | E072 | 3782 |
| chr2 | 233739517 | 233739582 | E072 | 3527 |
| chr2 | 233742559 | 233742609 | E072 | 500 |
| chr2 | 233742702 | 233742768 | E072 | 341 |
| chr2 | 233744953 | 233745003 | E072 | 1844 |
| chr2 | 233755584 | 233756215 | E072 | 12475 |
| chr2 | 233756362 | 233756537 | E072 | 13253 |
| chr2 | 233698362 | 233698412 | E073 | 44697 |
| chr2 | 233700383 | 233700607 | E073 | 42502 |
| chr2 | 233700723 | 233700792 | E073 | 42317 |
| chr2 | 233703137 | 233703679 | E073 | 39430 |
| chr2 | 233704049 | 233704409 | E073 | 38700 |
| chr2 | 233704448 | 233704757 | E073 | 38352 |
| chr2 | 233736314 | 233736456 | E073 | 6653 |
| chr2 | 233736777 | 233736885 | E073 | 6224 |
| chr2 | 233737006 | 233737148 | E073 | 5961 |
| chr2 | 233737676 | 233737833 | E073 | 5276 |
| chr2 | 233738838 | 233739208 | E073 | 3901 |
| chr2 | 233739244 | 233739327 | E073 | 3782 |
| chr2 | 233739517 | 233739582 | E073 | 3527 |
| chr2 | 233742702 | 233742768 | E073 | 341 |
| chr2 | 233743698 | 233743778 | E073 | 589 |
| chr2 | 233744953 | 233745003 | E073 | 1844 |
| chr2 | 233755584 | 233756215 | E073 | 12475 |
| chr2 | 233756362 | 233756537 | E073 | 13253 |
| chr2 | 233766451 | 233766678 | E073 | 23342 |
| chr2 | 233766754 | 233766971 | E073 | 23645 |
| chr2 | 233698362 | 233698412 | E074 | 44697 |
| chr2 | 233698614 | 233698928 | E074 | 44181 |
| chr2 | 233700383 | 233700607 | E074 | 42502 |
| chr2 | 233703137 | 233703679 | E074 | 39430 |
| chr2 | 233704049 | 233704409 | E074 | 38700 |
| chr2 | 233704448 | 233704757 | E074 | 38352 |
| chr2 | 233718246 | 233718359 | E074 | 24750 |
| chr2 | 233734485 | 233734659 | E074 | 8450 |
| chr2 | 233734687 | 233734738 | E074 | 8371 |
| chr2 | 233736314 | 233736456 | E074 | 6653 |
| chr2 | 233736777 | 233736885 | E074 | 6224 |
| chr2 | 233737006 | 233737148 | E074 | 5961 |
| chr2 | 233737676 | 233737833 | E074 | 5276 |
| chr2 | 233738838 | 233739208 | E074 | 3901 |
| chr2 | 233739244 | 233739327 | E074 | 3782 |
| chr2 | 233739517 | 233739582 | E074 | 3527 |
| chr2 | 233742559 | 233742609 | E074 | 500 |
| chr2 | 233742702 | 233742768 | E074 | 341 |
| chr2 | 233755584 | 233756215 | E074 | 12475 |
| chr2 | 233756362 | 233756537 | E074 | 13253 |
| chr2 | 233766451 | 233766678 | E074 | 23342 |
| chr2 | 233766754 | 233766971 | E074 | 23645 |
| chr2 | 233736314 | 233736456 | E081 | 6653 |
| chr2 | 233736777 | 233736885 | E081 | 6224 |
| chr2 | 233755584 | 233756215 | E082 | 12475 |
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr2 | 233740430 | 233740626 | E067 | 2483 |
| chr2 | 233740668 | 233740754 | E067 | 2355 |
| chr2 | 233740856 | 233740901 | E067 | 2208 |
| chr2 | 233740931 | 233741847 | E067 | 1262 |
| chr2 | 233741942 | 233742177 | E067 | 932 |
| chr2 | 233791857 | 233791988 | E067 | 48748 |
| chr2 | 233792068 | 233792194 | E067 | 48959 |
| chr2 | 233792256 | 233792383 | E067 | 49147 |
| chr2 | 233740430 | 233740626 | E068 | 2483 |
| chr2 | 233740668 | 233740754 | E068 | 2355 |
| chr2 | 233740856 | 233740901 | E068 | 2208 |
| chr2 | 233740931 | 233741847 | E068 | 1262 |
| chr2 | 233741942 | 233742177 | E068 | 932 |
| chr2 | 233791857 | 233791988 | E068 | 48748 |
| chr2 | 233792068 | 233792194 | E068 | 48959 |
| chr2 | 233792256 | 233792383 | E068 | 49147 |
| chr2 | 233792617 | 233792718 | E068 | 49508 |
| chr2 | 233792824 | 233792965 | E068 | 49715 |
| chr2 | 233740430 | 233740626 | E069 | 2483 |
| chr2 | 233740668 | 233740754 | E069 | 2355 |
| chr2 | 233740856 | 233740901 | E069 | 2208 |
| chr2 | 233740931 | 233741847 | E069 | 1262 |
| chr2 | 233741942 | 233742177 | E069 | 932 |
| chr2 | 233791857 | 233791988 | E069 | 48748 |
| chr2 | 233792068 | 233792194 | E069 | 48959 |
| chr2 | 233792256 | 233792383 | E069 | 49147 |
| chr2 | 233792617 | 233792718 | E069 | 49508 |
| chr2 | 233792824 | 233792965 | E069 | 49715 |
| chr2 | 233740430 | 233740626 | E070 | 2483 |
| chr2 | 233740856 | 233740901 | E070 | 2208 |
| chr2 | 233740931 | 233741847 | E070 | 1262 |
| chr2 | 233741942 | 233742177 | E070 | 932 |
| chr2 | 233792824 | 233792965 | E070 | 49715 |
| chr2 | 233740430 | 233740626 | E071 | 2483 |
| chr2 | 233740668 | 233740754 | E071 | 2355 |
| chr2 | 233740856 | 233740901 | E071 | 2208 |
| chr2 | 233740931 | 233741847 | E071 | 1262 |
| chr2 | 233741942 | 233742177 | E071 | 932 |
| chr2 | 233791857 | 233791988 | E071 | 48748 |
| chr2 | 233792068 | 233792194 | E071 | 48959 |
| chr2 | 233792256 | 233792383 | E071 | 49147 |
| chr2 | 233792617 | 233792718 | E071 | 49508 |
| chr2 | 233792824 | 233792965 | E071 | 49715 |
| chr2 | 233740430 | 233740626 | E072 | 2483 |
| chr2 | 233740668 | 233740754 | E072 | 2355 |
| chr2 | 233740856 | 233740901 | E072 | 2208 |
| chr2 | 233740931 | 233741847 | E072 | 1262 |
| chr2 | 233741942 | 233742177 | E072 | 932 |
| chr2 | 233791857 | 233791988 | E072 | 48748 |
| chr2 | 233792068 | 233792194 | E072 | 48959 |
| chr2 | 233792256 | 233792383 | E072 | 49147 |
| chr2 | 233792617 | 233792718 | E072 | 49508 |
| chr2 | 233792824 | 233792965 | E072 | 49715 |
| chr2 | 233740430 | 233740626 | E073 | 2483 |
| chr2 | 233740668 | 233740754 | E073 | 2355 |
| chr2 | 233740856 | 233740901 | E073 | 2208 |
| chr2 | 233740931 | 233741847 | E073 | 1262 |
| chr2 | 233741942 | 233742177 | E073 | 932 |
| chr2 | 233791857 | 233791988 | E073 | 48748 |
| chr2 | 233792068 | 233792194 | E073 | 48959 |
| chr2 | 233792256 | 233792383 | E073 | 49147 |
| chr2 | 233792617 | 233792718 | E073 | 49508 |
| chr2 | 233792824 | 233792965 | E073 | 49715 |
| chr2 | 233740430 | 233740626 | E074 | 2483 |
| chr2 | 233740668 | 233740754 | E074 | 2355 |
| chr2 | 233740856 | 233740901 | E074 | 2208 |
| chr2 | 233740931 | 233741847 | E074 | 1262 |
| chr2 | 233792068 | 233792194 | E074 | 48959 |
| chr2 | 233792256 | 233792383 | E074 | 49147 |
| chr2 | 233792617 | 233792718 | E074 | 49508 |
| chr2 | 233792824 | 233792965 | E074 | 49715 |
| chr2 | 233740430 | 233740626 | E082 | 2483 |
| chr2 | 233740668 | 233740754 | E082 | 2355 |
| chr2 | 233740856 | 233740901 | E082 | 2208 |
| chr2 | 233740931 | 233741847 | E082 | 1262 |
| chr2 | 233741942 | 233742177 | E082 | 932 |
| chr2 | 233792617 | 233792718 | E082 | 49508 |
| chr2 | 233792824 | 233792965 | E082 | 49715 |