Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs886424 | chr6 | 30782002 | C | T | -1E0 | -1 | ncRNA_exonic | LINC00243, | CV:GWAScat, CV:GWASdb | Y | N | N | N |
 eQTL annotation | ||||||||
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs886424 | chr6 | 30782001 | HLA-A | 3105 | 1.86761E-1 | cis | ||
There is no meQTL for this SNP.
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr6 | 30736427 | 30736602 | E067 | 45400 |
| chr6 | 30748762 | 30748894 | E067 | 33108 |
| chr6 | 30789703 | 30790554 | E067 | 7701 |
| chr6 | 30795650 | 30795984 | E067 | 13648 |
| chr6 | 30795986 | 30796967 | E067 | 13984 |
| chr6 | 30805667 | 30805807 | E067 | 23665 |
| chr6 | 30805897 | 30806033 | E067 | 23895 |
| chr6 | 30806189 | 30806548 | E067 | 24187 |
| chr6 | 30736427 | 30736602 | E068 | 45400 |
| chr6 | 30736639 | 30738260 | E068 | 43742 |
| chr6 | 30745849 | 30746367 | E068 | 35635 |
| chr6 | 30746416 | 30746774 | E068 | 35228 |
| chr6 | 30746872 | 30746955 | E068 | 35047 |
| chr6 | 30747037 | 30747720 | E068 | 34282 |
| chr6 | 30747776 | 30748277 | E068 | 33725 |
| chr6 | 30748762 | 30748894 | E068 | 33108 |
| chr6 | 30789703 | 30790554 | E068 | 7701 |
| chr6 | 30795650 | 30795984 | E068 | 13648 |
| chr6 | 30795986 | 30796967 | E068 | 13984 |
| chr6 | 30736427 | 30736602 | E069 | 45400 |
| chr6 | 30748762 | 30748894 | E069 | 33108 |
| chr6 | 30795650 | 30795984 | E069 | 13648 |
| chr6 | 30795986 | 30796967 | E069 | 13984 |
| chr6 | 30747037 | 30747720 | E070 | 34282 |
| chr6 | 30748762 | 30748894 | E070 | 33108 |
| chr6 | 30804251 | 30804471 | E070 | 22249 |
| chr6 | 30804904 | 30804958 | E070 | 22902 |
| chr6 | 30805667 | 30805807 | E070 | 23665 |
| chr6 | 30805897 | 30806033 | E070 | 23895 |
| chr6 | 30806189 | 30806548 | E070 | 24187 |
| chr6 | 30736427 | 30736602 | E071 | 45400 |
| chr6 | 30736639 | 30738260 | E071 | 43742 |
| chr6 | 30745849 | 30746367 | E071 | 35635 |
| chr6 | 30746416 | 30746774 | E071 | 35228 |
| chr6 | 30747037 | 30747720 | E071 | 34282 |
| chr6 | 30747776 | 30748277 | E071 | 33725 |
| chr6 | 30748470 | 30748731 | E071 | 33271 |
| chr6 | 30748762 | 30748894 | E071 | 33108 |
| chr6 | 30789703 | 30790554 | E071 | 7701 |
| chr6 | 30790567 | 30790758 | E071 | 8565 |
| chr6 | 30795650 | 30795984 | E071 | 13648 |
| chr6 | 30795986 | 30796967 | E071 | 13984 |
| chr6 | 30805667 | 30805807 | E071 | 23665 |
| chr6 | 30736639 | 30738260 | E072 | 43742 |
| chr6 | 30747776 | 30748277 | E072 | 33725 |
| chr6 | 30748762 | 30748894 | E072 | 33108 |
| chr6 | 30749173 | 30750706 | E072 | 31296 |
| chr6 | 30789703 | 30790554 | E072 | 7701 |
| chr6 | 30795650 | 30795984 | E072 | 13648 |
| chr6 | 30795986 | 30796967 | E072 | 13984 |
| chr6 | 30734231 | 30734643 | E073 | 47359 |
| chr6 | 30736427 | 30736602 | E073 | 45400 |
| chr6 | 30736639 | 30738260 | E073 | 43742 |
| chr6 | 30746416 | 30746774 | E073 | 35228 |
| chr6 | 30746872 | 30746955 | E073 | 35047 |
| chr6 | 30747037 | 30747720 | E073 | 34282 |
| chr6 | 30747776 | 30748277 | E073 | 33725 |
| chr6 | 30748470 | 30748731 | E073 | 33271 |
| chr6 | 30748762 | 30748894 | E073 | 33108 |
| chr6 | 30795650 | 30795984 | E073 | 13648 |
| chr6 | 30795986 | 30796967 | E073 | 13984 |
| chr6 | 30744443 | 30744515 | E074 | 37487 |
| chr6 | 30745849 | 30746367 | E074 | 35635 |
| chr6 | 30746416 | 30746774 | E074 | 35228 |
| chr6 | 30747776 | 30748277 | E074 | 33725 |
| chr6 | 30748762 | 30748894 | E074 | 33108 |
| chr6 | 30749173 | 30750706 | E074 | 31296 |
| chr6 | 30766206 | 30766278 | E074 | 15724 |
| chr6 | 30766312 | 30766548 | E074 | 15454 |
| chr6 | 30766569 | 30766867 | E074 | 15135 |
| chr6 | 30789703 | 30790554 | E074 | 7701 |
| chr6 | 30790567 | 30790758 | E074 | 8565 |
| chr6 | 30795650 | 30795984 | E074 | 13648 |
| chr6 | 30795986 | 30796967 | E074 | 13984 |
| chr6 | 30805667 | 30805807 | E074 | 23665 |
| chr6 | 30805897 | 30806033 | E074 | 23895 |
| chr6 | 30806189 | 30806548 | E074 | 24187 |
| chr6 | 30806621 | 30806671 | E074 | 24619 |
| chr6 | 30748470 | 30748731 | E081 | 33271 |
| chr6 | 30748762 | 30748894 | E081 | 33108 |
| chr6 | 30824501 | 30824663 | E081 | 42499 |
| chr6 | 30824970 | 30825048 | E081 | 42968 |
| chr6 | 30748470 | 30748731 | E082 | 33271 |
| chr6 | 30748762 | 30748894 | E082 | 33108 |
| chr6 | 30749173 | 30750706 | E082 | 31296 |