Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs9420 | chr11 | 57510294 | A | G | 6.652E-8 | 1.063 | ncRNA_intronic | TMX2-CTNND1, | CV:GWAScat, CV:PGC128, CV:PGCnp | N | N | N | N |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr11 | 57478436 | 57478486 | E067 | 31808 |
| chr11 | 57482139 | 57482189 | E067 | 28105 |
| chr11 | 57510512 | 57510734 | E067 | 218 |
| chr11 | 57510888 | 57510959 | E067 | 594 |
| chr11 | 57511171 | 57511225 | E067 | 877 |
| chr11 | 57511310 | 57511360 | E067 | 1016 |
| chr11 | 57539438 | 57539488 | E067 | 29144 |
| chr11 | 57539851 | 57539901 | E067 | 29557 |
| chr11 | 57541605 | 57541690 | E067 | 31311 |
| chr11 | 57541752 | 57541926 | E067 | 31458 |
| chr11 | 57542042 | 57542115 | E067 | 31748 |
| chr11 | 57542710 | 57542768 | E067 | 32416 |
| chr11 | 57542887 | 57544417 | E067 | 32593 |
| chr11 | 57544424 | 57544772 | E067 | 34130 |
| chr11 | 57544852 | 57544902 | E067 | 34558 |
| chr11 | 57545015 | 57545074 | E067 | 34721 |
| chr11 | 57547568 | 57547618 | E067 | 37274 |
| chr11 | 57548047 | 57548156 | E067 | 37753 |
| chr11 | 57548171 | 57548328 | E067 | 37877 |
| chr11 | 57548541 | 57548623 | E067 | 38247 |
| chr11 | 57548683 | 57549561 | E067 | 38389 |
| chr11 | 57549829 | 57549899 | E067 | 39535 |
| chr11 | 57550010 | 57550179 | E067 | 39716 |
| chr11 | 57550182 | 57550464 | E067 | 39888 |
| chr11 | 57550696 | 57550892 | E067 | 40402 |
| chr11 | 57551691 | 57551782 | E067 | 41397 |
| chr11 | 57551785 | 57551855 | E067 | 41491 |
| chr11 | 57551915 | 57551965 | E067 | 41621 |
| chr11 | 57559089 | 57560099 | E067 | 48795 |
| chr11 | 57478117 | 57478157 | E068 | 32137 |
| chr11 | 57478253 | 57478313 | E068 | 31981 |
| chr11 | 57482139 | 57482189 | E068 | 28105 |
| chr11 | 57533344 | 57533394 | E068 | 23050 |
| chr11 | 57533494 | 57533556 | E068 | 23200 |
| chr11 | 57533718 | 57533830 | E068 | 23424 |
| chr11 | 57533944 | 57534004 | E068 | 23650 |
| chr11 | 57534065 | 57534131 | E068 | 23771 |
| chr11 | 57534328 | 57534378 | E068 | 24034 |
| chr11 | 57534379 | 57534431 | E068 | 24085 |
| chr11 | 57534665 | 57534800 | E068 | 24371 |
| chr11 | 57534885 | 57534935 | E068 | 24591 |
| chr11 | 57534994 | 57535044 | E068 | 24700 |
| chr11 | 57536221 | 57536306 | E068 | 25927 |
| chr11 | 57536343 | 57536393 | E068 | 26049 |
| chr11 | 57536835 | 57536885 | E068 | 26541 |
| chr11 | 57538633 | 57538695 | E068 | 28339 |
| chr11 | 57539851 | 57539901 | E068 | 29557 |
| chr11 | 57540009 | 57540301 | E068 | 29715 |
| chr11 | 57542710 | 57542768 | E068 | 32416 |
| chr11 | 57544424 | 57544772 | E068 | 34130 |
| chr11 | 57544852 | 57544902 | E068 | 34558 |
| chr11 | 57545015 | 57545074 | E068 | 34721 |
| chr11 | 57547568 | 57547618 | E068 | 37274 |
| chr11 | 57548047 | 57548156 | E068 | 37753 |
| chr11 | 57548171 | 57548328 | E068 | 37877 |
| chr11 | 57548541 | 57548623 | E068 | 38247 |
| chr11 | 57548683 | 57549561 | E068 | 38389 |
| chr11 | 57550010 | 57550179 | E068 | 39716 |
| chr11 | 57554017 | 57554261 | E068 | 43723 |
| chr11 | 57554266 | 57554319 | E068 | 43972 |
| chr11 | 57554358 | 57554408 | E068 | 44064 |
| chr11 | 57558868 | 57559014 | E068 | 48574 |
| chr11 | 57559089 | 57560099 | E068 | 48795 |
| chr11 | 57477408 | 57477516 | E069 | 32778 |
| chr11 | 57478117 | 57478157 | E069 | 32137 |
| chr11 | 57478253 | 57478313 | E069 | 31981 |
| chr11 | 57478436 | 57478486 | E069 | 31808 |
| chr11 | 57510321 | 57510479 | E069 | 27 |
| chr11 | 57510512 | 57510734 | E069 | 218 |
| chr11 | 57533344 | 57533394 | E069 | 23050 |
| chr11 | 57533494 | 57533556 | E069 | 23200 |
| chr11 | 57533718 | 57533830 | E069 | 23424 |
| chr11 | 57533944 | 57534004 | E069 | 23650 |
| chr11 | 57534065 | 57534131 | E069 | 23771 |
| chr11 | 57534328 | 57534378 | E069 | 24034 |
| chr11 | 57534379 | 57534431 | E069 | 24085 |
| chr11 | 57534665 | 57534800 | E069 | 24371 |
| chr11 | 57534885 | 57534935 | E069 | 24591 |
| chr11 | 57534994 | 57535044 | E069 | 24700 |
| chr11 | 57538385 | 57538528 | E069 | 28091 |
| chr11 | 57538633 | 57538695 | E069 | 28339 |
| chr11 | 57541605 | 57541690 | E069 | 31311 |
| chr11 | 57541752 | 57541926 | E069 | 31458 |
| chr11 | 57542042 | 57542115 | E069 | 31748 |
| chr11 | 57542710 | 57542768 | E069 | 32416 |
| chr11 | 57542887 | 57544417 | E069 | 32593 |
| chr11 | 57544424 | 57544772 | E069 | 34130 |
| chr11 | 57544852 | 57544902 | E069 | 34558 |
| chr11 | 57545015 | 57545074 | E069 | 34721 |
| chr11 | 57547568 | 57547618 | E069 | 37274 |
| chr11 | 57554017 | 57554261 | E069 | 43723 |
| chr11 | 57554266 | 57554319 | E069 | 43972 |
| chr11 | 57554358 | 57554408 | E069 | 44064 |
| chr11 | 57559089 | 57560099 | E069 | 48795 |
| chr11 | 57510512 | 57510734 | E070 | 218 |
| chr11 | 57534665 | 57534800 | E070 | 24371 |
| chr11 | 57534885 | 57534935 | E070 | 24591 |
| chr11 | 57534994 | 57535044 | E070 | 24700 |
| chr11 | 57542887 | 57544417 | E070 | 32593 |
| chr11 | 57544852 | 57544902 | E070 | 34558 |
| chr11 | 57545015 | 57545074 | E070 | 34721 |
| chr11 | 57477721 | 57477781 | E071 | 32513 |
| chr11 | 57478117 | 57478157 | E071 | 32137 |
| chr11 | 57478253 | 57478313 | E071 | 31981 |
| chr11 | 57510512 | 57510734 | E071 | 218 |
| chr11 | 57533344 | 57533394 | E071 | 23050 |
| chr11 | 57533494 | 57533556 | E071 | 23200 |
| chr11 | 57533718 | 57533830 | E071 | 23424 |
| chr11 | 57533944 | 57534004 | E071 | 23650 |
| chr11 | 57534065 | 57534131 | E071 | 23771 |
| chr11 | 57534328 | 57534378 | E071 | 24034 |
| chr11 | 57534379 | 57534431 | E071 | 24085 |
| chr11 | 57534665 | 57534800 | E071 | 24371 |
| chr11 | 57534885 | 57534935 | E071 | 24591 |
| chr11 | 57534994 | 57535044 | E071 | 24700 |
| chr11 | 57536835 | 57536885 | E071 | 26541 |
| chr11 | 57539851 | 57539901 | E071 | 29557 |
| chr11 | 57540009 | 57540301 | E071 | 29715 |
| chr11 | 57540304 | 57540467 | E071 | 30010 |
| chr11 | 57540649 | 57540720 | E071 | 30355 |
| chr11 | 57540823 | 57540918 | E071 | 30529 |
| chr11 | 57541324 | 57541384 | E071 | 31030 |
| chr11 | 57541605 | 57541690 | E071 | 31311 |
| chr11 | 57541752 | 57541926 | E071 | 31458 |
| chr11 | 57542042 | 57542115 | E071 | 31748 |
| chr11 | 57542710 | 57542768 | E071 | 32416 |
| chr11 | 57542887 | 57544417 | E071 | 32593 |
| chr11 | 57544424 | 57544772 | E071 | 34130 |
| chr11 | 57547568 | 57547618 | E071 | 37274 |
| chr11 | 57548047 | 57548156 | E071 | 37753 |
| chr11 | 57548171 | 57548328 | E071 | 37877 |
| chr11 | 57548541 | 57548623 | E071 | 38247 |
| chr11 | 57548683 | 57549561 | E071 | 38389 |
| chr11 | 57550010 | 57550179 | E071 | 39716 |
| chr11 | 57551691 | 57551782 | E071 | 41397 |
| chr11 | 57551785 | 57551855 | E071 | 41491 |
| chr11 | 57552580 | 57553081 | E071 | 42286 |
| chr11 | 57553472 | 57553542 | E071 | 43178 |
| chr11 | 57553564 | 57553649 | E071 | 43270 |
| chr11 | 57554017 | 57554261 | E071 | 43723 |
| chr11 | 57554266 | 57554319 | E071 | 43972 |
| chr11 | 57554358 | 57554408 | E071 | 44064 |
| chr11 | 57554493 | 57556618 | E071 | 44199 |
| chr11 | 57558509 | 57558616 | E071 | 48215 |
| chr11 | 57558625 | 57558765 | E071 | 48331 |
| chr11 | 57478436 | 57478486 | E072 | 31808 |
| chr11 | 57508020 | 57508102 | E072 | 2192 |
| chr11 | 57533344 | 57533394 | E072 | 23050 |
| chr11 | 57533494 | 57533556 | E072 | 23200 |
| chr11 | 57541605 | 57541690 | E072 | 31311 |
| chr11 | 57541752 | 57541926 | E072 | 31458 |
| chr11 | 57542042 | 57542115 | E072 | 31748 |
| chr11 | 57542710 | 57542768 | E072 | 32416 |
| chr11 | 57542887 | 57544417 | E072 | 32593 |
| chr11 | 57544424 | 57544772 | E072 | 34130 |
| chr11 | 57544852 | 57544902 | E072 | 34558 |
| chr11 | 57545015 | 57545074 | E072 | 34721 |
| chr11 | 57547568 | 57547618 | E072 | 37274 |
| chr11 | 57548047 | 57548156 | E072 | 37753 |
| chr11 | 57548171 | 57548328 | E072 | 37877 |
| chr11 | 57548541 | 57548623 | E072 | 38247 |
| chr11 | 57548683 | 57549561 | E072 | 38389 |
| chr11 | 57549829 | 57549899 | E072 | 39535 |
| chr11 | 57550010 | 57550179 | E072 | 39716 |
| chr11 | 57550182 | 57550464 | E072 | 39888 |
| chr11 | 57554017 | 57554261 | E072 | 43723 |
| chr11 | 57554266 | 57554319 | E072 | 43972 |
| chr11 | 57554358 | 57554408 | E072 | 44064 |
| chr11 | 57558868 | 57559014 | E072 | 48574 |
| chr11 | 57559089 | 57560099 | E072 | 48795 |
| chr11 | 57477721 | 57477781 | E073 | 32513 |
| chr11 | 57478117 | 57478157 | E073 | 32137 |
| chr11 | 57478253 | 57478313 | E073 | 31981 |
| chr11 | 57478436 | 57478486 | E073 | 31808 |
| chr11 | 57510512 | 57510734 | E073 | 218 |
| chr11 | 57541605 | 57541690 | E073 | 31311 |
| chr11 | 57541752 | 57541926 | E073 | 31458 |
| chr11 | 57542887 | 57544417 | E073 | 32593 |
| chr11 | 57544424 | 57544772 | E073 | 34130 |
| chr11 | 57544852 | 57544902 | E073 | 34558 |
| chr11 | 57545015 | 57545074 | E073 | 34721 |
| chr11 | 57547568 | 57547618 | E073 | 37274 |
| chr11 | 57548047 | 57548156 | E073 | 37753 |
| chr11 | 57548171 | 57548328 | E073 | 37877 |
| chr11 | 57548541 | 57548623 | E073 | 38247 |
| chr11 | 57548683 | 57549561 | E073 | 38389 |
| chr11 | 57554266 | 57554319 | E073 | 43972 |
| chr11 | 57554358 | 57554408 | E073 | 44064 |
| chr11 | 57558868 | 57559014 | E073 | 48574 |
| chr11 | 57559089 | 57560099 | E073 | 48795 |
| chr11 | 57478436 | 57478486 | E074 | 31808 |
| chr11 | 57510321 | 57510479 | E074 | 27 |
| chr11 | 57533344 | 57533394 | E074 | 23050 |
| chr11 | 57533494 | 57533556 | E074 | 23200 |
| chr11 | 57533718 | 57533830 | E074 | 23424 |
| chr11 | 57533944 | 57534004 | E074 | 23650 |
| chr11 | 57534065 | 57534131 | E074 | 23771 |
| chr11 | 57534328 | 57534378 | E074 | 24034 |
| chr11 | 57534379 | 57534431 | E074 | 24085 |
| chr11 | 57534665 | 57534800 | E074 | 24371 |
| chr11 | 57534885 | 57534935 | E074 | 24591 |
| chr11 | 57534994 | 57535044 | E074 | 24700 |
| chr11 | 57540649 | 57540720 | E074 | 30355 |
| chr11 | 57540823 | 57540918 | E074 | 30529 |
| chr11 | 57542042 | 57542115 | E074 | 31748 |
| chr11 | 57542710 | 57542768 | E074 | 32416 |
| chr11 | 57542887 | 57544417 | E074 | 32593 |
| chr11 | 57544424 | 57544772 | E074 | 34130 |
| chr11 | 57544852 | 57544902 | E074 | 34558 |
| chr11 | 57545015 | 57545074 | E074 | 34721 |
| chr11 | 57547568 | 57547618 | E074 | 37274 |
| chr11 | 57548047 | 57548156 | E074 | 37753 |
| chr11 | 57548171 | 57548328 | E074 | 37877 |
| chr11 | 57548541 | 57548623 | E074 | 38247 |
| chr11 | 57548683 | 57549561 | E074 | 38389 |
| chr11 | 57551691 | 57551782 | E074 | 41397 |
| chr11 | 57551785 | 57551855 | E074 | 41491 |
| chr11 | 57551915 | 57551965 | E074 | 41621 |
| chr11 | 57554017 | 57554261 | E074 | 43723 |
| chr11 | 57554266 | 57554319 | E074 | 43972 |
| chr11 | 57554358 | 57554408 | E074 | 44064 |
| chr11 | 57554493 | 57556618 | E074 | 44199 |
| chr11 | 57477408 | 57477516 | E081 | 32778 |
| chr11 | 57477585 | 57477635 | E081 | 32659 |
| chr11 | 57477721 | 57477781 | E081 | 32513 |
| chr11 | 57478117 | 57478157 | E081 | 32137 |
| chr11 | 57478253 | 57478313 | E081 | 31981 |
| chr11 | 57478436 | 57478486 | E081 | 31808 |
| chr11 | 57533344 | 57533394 | E081 | 23050 |
| chr11 | 57533494 | 57533556 | E081 | 23200 |
| chr11 | 57534328 | 57534378 | E081 | 24034 |
| chr11 | 57534379 | 57534431 | E081 | 24085 |
| chr11 | 57534665 | 57534800 | E081 | 24371 |
| chr11 | 57534885 | 57534935 | E081 | 24591 |
| chr11 | 57534994 | 57535044 | E081 | 24700 |
| chr11 | 57536692 | 57536749 | E081 | 26398 |
| chr11 | 57536835 | 57536885 | E081 | 26541 |
| chr11 | 57542887 | 57544417 | E081 | 32593 |
| chr11 | 57544852 | 57544902 | E081 | 34558 |
| chr11 | 57545015 | 57545074 | E081 | 34721 |
| chr11 | 57477585 | 57477635 | E082 | 32659 |
| chr11 | 57477721 | 57477781 | E082 | 32513 |
| chr11 | 57478117 | 57478157 | E082 | 32137 |
| chr11 | 57478253 | 57478313 | E082 | 31981 |
| chr11 | 57478436 | 57478486 | E082 | 31808 |
| chr11 | 57534665 | 57534800 | E082 | 24371 |
| chr11 | 57534885 | 57534935 | E082 | 24591 |
| chr11 | 57534994 | 57535044 | E082 | 24700 |
| chr11 | 57542887 | 57544417 | E082 | 32593 |
| chr11 | 57544424 | 57544772 | E082 | 34130 |
| chr11 | 57544852 | 57544902 | E082 | 34558 |
| chr11 | 57545015 | 57545074 | E082 | 34721 |
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr11 | 57478836 | 57480700 | E067 | 29594 |
| chr11 | 57480702 | 57480871 | E067 | 29423 |
| chr11 | 57508354 | 57510134 | E067 | 160 |
| chr11 | 57528714 | 57531904 | E067 | 18420 |
| chr11 | 57478836 | 57480700 | E068 | 29594 |
| chr11 | 57480702 | 57480871 | E068 | 29423 |
| chr11 | 57508354 | 57510134 | E068 | 160 |
| chr11 | 57528714 | 57531904 | E068 | 18420 |
| chr11 | 57478836 | 57480700 | E069 | 29594 |
| chr11 | 57480702 | 57480871 | E069 | 29423 |
| chr11 | 57508354 | 57510134 | E069 | 160 |
| chr11 | 57528714 | 57531904 | E069 | 18420 |
| chr11 | 57478836 | 57480700 | E070 | 29594 |
| chr11 | 57480702 | 57480871 | E070 | 29423 |
| chr11 | 57508354 | 57510134 | E070 | 160 |
| chr11 | 57528714 | 57531904 | E070 | 18420 |
| chr11 | 57478836 | 57480700 | E071 | 29594 |
| chr11 | 57480702 | 57480871 | E071 | 29423 |
| chr11 | 57508354 | 57510134 | E071 | 160 |
| chr11 | 57528714 | 57531904 | E071 | 18420 |
| chr11 | 57478836 | 57480700 | E072 | 29594 |
| chr11 | 57480702 | 57480871 | E072 | 29423 |
| chr11 | 57508354 | 57510134 | E072 | 160 |
| chr11 | 57528714 | 57531904 | E072 | 18420 |
| chr11 | 57478836 | 57480700 | E073 | 29594 |
| chr11 | 57480702 | 57480871 | E073 | 29423 |
| chr11 | 57508354 | 57510134 | E073 | 160 |
| chr11 | 57528714 | 57531904 | E073 | 18420 |
| chr11 | 57478836 | 57480700 | E074 | 29594 |
| chr11 | 57480702 | 57480871 | E074 | 29423 |
| chr11 | 57508354 | 57510134 | E074 | 160 |
| chr11 | 57528714 | 57531904 | E074 | 18420 |
| chr11 | 57478836 | 57480700 | E081 | 29594 |
| chr11 | 57480702 | 57480871 | E081 | 29423 |
| chr11 | 57508354 | 57510134 | E081 | 160 |
| chr11 | 57478836 | 57480700 | E082 | 29594 |
| chr11 | 57480702 | 57480871 | E082 | 29423 |
| chr11 | 57508354 | 57510134 | E082 | 160 |
| chr11 | 57528714 | 57531904 | E082 | 18420 |