Search results:
SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs950169 | chr15 | 84706461 | T | C | 7.62E-11 | 0.924 | exonic | ADAMTSL3, | CV:GWAScat, CV:GWASdb, CV:PGC128, CV:PGCnp | Y | N | N | N |
eQTL annotation | ||||||||
SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
---|---|---|---|---|---|---|---|---|
rs950169 | 15 | 84706461 | AC103965.1 | ENSG00000225151.6 | 1.01754E-9 | 2.21696E-3 | 192427 | gtex_brain_putamen_basal |
There is no meQTL for this SNP.
Enhancer annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr15 | 84659863 | 84659913 | E074 | 46548 |
chr15 | 84660012 | 84660066 | E074 | 46395 |
chr15 | 84660143 | 84660256 | E074 | 46205 |
chr15 | 84703424 | 84703620 | E081 | 2841 |
chr15 | 84703648 | 84703962 | E081 | 2499 |
chr15 | 84659647 | 84659701 | E082 | 46760 |
chr15 | 84750679 | 84750759 | E082 | 44218 |
Promoter annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr15 | 84748236 | 84748306 | E067 | 41775 |
chr15 | 84748369 | 84748466 | E067 | 41908 |
chr15 | 84748517 | 84748567 | E067 | 42056 |
chr15 | 84748658 | 84749464 | E067 | 42197 |
chr15 | 84749606 | 84749699 | E067 | 43145 |
chr15 | 84748236 | 84748306 | E068 | 41775 |
chr15 | 84748369 | 84748466 | E068 | 41908 |
chr15 | 84748517 | 84748567 | E068 | 42056 |
chr15 | 84748658 | 84749464 | E068 | 42197 |
chr15 | 84749606 | 84749699 | E068 | 43145 |
chr15 | 84748236 | 84748306 | E069 | 41775 |
chr15 | 84748369 | 84748466 | E069 | 41908 |
chr15 | 84748517 | 84748567 | E069 | 42056 |
chr15 | 84748658 | 84749464 | E069 | 42197 |
chr15 | 84749606 | 84749699 | E069 | 43145 |
chr15 | 84748236 | 84748306 | E070 | 41775 |
chr15 | 84748369 | 84748466 | E070 | 41908 |
chr15 | 84748658 | 84749464 | E070 | 42197 |
chr15 | 84749606 | 84749699 | E070 | 43145 |
chr15 | 84748369 | 84748466 | E071 | 41908 |
chr15 | 84748517 | 84748567 | E071 | 42056 |
chr15 | 84748658 | 84749464 | E071 | 42197 |
chr15 | 84748236 | 84748306 | E072 | 41775 |
chr15 | 84748369 | 84748466 | E072 | 41908 |
chr15 | 84748517 | 84748567 | E072 | 42056 |
chr15 | 84748658 | 84749464 | E072 | 42197 |
chr15 | 84748236 | 84748306 | E073 | 41775 |
chr15 | 84748369 | 84748466 | E073 | 41908 |
chr15 | 84748517 | 84748567 | E073 | 42056 |
chr15 | 84748658 | 84749464 | E073 | 42197 |
chr15 | 84749606 | 84749699 | E073 | 43145 |
chr15 | 84748658 | 84749464 | E074 | 42197 |
chr15 | 84748236 | 84748306 | E081 | 41775 |
chr15 | 84748369 | 84748466 | E081 | 41908 |
chr15 | 84748517 | 84748567 | E081 | 42056 |
chr15 | 84748658 | 84749464 | E081 | 42197 |
chr15 | 84749606 | 84749699 | E081 | 43145 |
chr15 | 84748236 | 84748306 | E082 | 41775 |
chr15 | 84748369 | 84748466 | E082 | 41908 |
chr15 | 84748517 | 84748567 | E082 | 42056 |
chr15 | 84748658 | 84749464 | E082 | 42197 |
chr15 | 84749606 | 84749699 | E082 | 43145 |