Search results:
| SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Source | eSNP | meSNP | In CNV | In Linkage |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs9841616 | chr3 | 181167585 | A | T | 1.654E-8 | 0.922 | ncRNA_intronic | SOX2-OT, | CV:GWAScat, CV:PGC128, CV:PGCnp | N | N | N | N |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr3 | 181142435 | 181142694 | E067 | 24891 |
| chr3 | 181176654 | 181176718 | E067 | 9069 |
| chr3 | 181176732 | 181176955 | E067 | 9147 |
| chr3 | 181182183 | 181182278 | E067 | 14598 |
| chr3 | 181203947 | 181204658 | E067 | 36362 |
| chr3 | 181205117 | 181205236 | E067 | 37532 |
| chr3 | 181205501 | 181205553 | E067 | 37916 |
| chr3 | 181205575 | 181205625 | E067 | 37990 |
| chr3 | 181214966 | 181215082 | E067 | 47381 |
| chr3 | 181215210 | 181215520 | E067 | 47625 |
| chr3 | 181136615 | 181136696 | E068 | 30889 |
| chr3 | 181142435 | 181142694 | E068 | 24891 |
| chr3 | 181143020 | 181143114 | E068 | 24471 |
| chr3 | 181143246 | 181143311 | E068 | 24274 |
| chr3 | 181173874 | 181173968 | E068 | 6289 |
| chr3 | 181182183 | 181182278 | E068 | 14598 |
| chr3 | 181203947 | 181204658 | E068 | 36362 |
| chr3 | 181205501 | 181205553 | E068 | 37916 |
| chr3 | 181205575 | 181205625 | E068 | 37990 |
| chr3 | 181206435 | 181206610 | E068 | 38850 |
| chr3 | 181214966 | 181215082 | E068 | 47381 |
| chr3 | 181136160 | 181136336 | E069 | 31249 |
| chr3 | 181136615 | 181136696 | E069 | 30889 |
| chr3 | 181142435 | 181142694 | E069 | 24891 |
| chr3 | 181143020 | 181143114 | E069 | 24471 |
| chr3 | 181172269 | 181172398 | E069 | 4684 |
| chr3 | 181173143 | 181173197 | E069 | 5558 |
| chr3 | 181176654 | 181176718 | E069 | 9069 |
| chr3 | 181176732 | 181176955 | E069 | 9147 |
| chr3 | 181203947 | 181204658 | E069 | 36362 |
| chr3 | 181205501 | 181205553 | E069 | 37916 |
| chr3 | 181205575 | 181205625 | E069 | 37990 |
| chr3 | 181206435 | 181206610 | E069 | 38850 |
| chr3 | 181136615 | 181136696 | E070 | 30889 |
| chr3 | 181172682 | 181172800 | E070 | 5097 |
| chr3 | 181173143 | 181173197 | E070 | 5558 |
| chr3 | 181176654 | 181176718 | E070 | 9069 |
| chr3 | 181176732 | 181176955 | E070 | 9147 |
| chr3 | 181201731 | 181201801 | E070 | 34146 |
| chr3 | 181201851 | 181202096 | E070 | 34266 |
| chr3 | 181203947 | 181204658 | E070 | 36362 |
| chr3 | 181205117 | 181205236 | E070 | 37532 |
| chr3 | 181205501 | 181205553 | E070 | 37916 |
| chr3 | 181205575 | 181205625 | E070 | 37990 |
| chr3 | 181206435 | 181206610 | E070 | 38850 |
| chr3 | 181213056 | 181213149 | E070 | 45471 |
| chr3 | 181136615 | 181136696 | E071 | 30889 |
| chr3 | 181142435 | 181142694 | E071 | 24891 |
| chr3 | 181143020 | 181143114 | E071 | 24471 |
| chr3 | 181173874 | 181173968 | E071 | 6289 |
| chr3 | 181176654 | 181176718 | E071 | 9069 |
| chr3 | 181176732 | 181176955 | E071 | 9147 |
| chr3 | 181182183 | 181182278 | E071 | 14598 |
| chr3 | 181203947 | 181204658 | E071 | 36362 |
| chr3 | 181205117 | 181205236 | E071 | 37532 |
| chr3 | 181205501 | 181205553 | E071 | 37916 |
| chr3 | 181205575 | 181205625 | E071 | 37990 |
| chr3 | 181214966 | 181215082 | E071 | 47381 |
| chr3 | 181215210 | 181215520 | E071 | 47625 |
| chr3 | 181136615 | 181136696 | E072 | 30889 |
| chr3 | 181142435 | 181142694 | E072 | 24891 |
| chr3 | 181182183 | 181182278 | E072 | 14598 |
| chr3 | 181214966 | 181215082 | E072 | 47381 |
| chr3 | 181215210 | 181215520 | E072 | 47625 |
| chr3 | 181135457 | 181135627 | E073 | 31958 |
| chr3 | 181135682 | 181135856 | E073 | 31729 |
| chr3 | 181136160 | 181136336 | E073 | 31249 |
| chr3 | 181142435 | 181142694 | E073 | 24891 |
| chr3 | 181143020 | 181143114 | E073 | 24471 |
| chr3 | 181172269 | 181172398 | E073 | 4684 |
| chr3 | 181172682 | 181172800 | E073 | 5097 |
| chr3 | 181182183 | 181182278 | E073 | 14598 |
| chr3 | 181136615 | 181136696 | E074 | 30889 |
| chr3 | 181173874 | 181173968 | E074 | 6289 |
| chr3 | 181182183 | 181182278 | E074 | 14598 |
| chr3 | 181203947 | 181204658 | E074 | 36362 |
| chr3 | 181205117 | 181205236 | E074 | 37532 |
| chr3 | 181205501 | 181205553 | E074 | 37916 |
| chr3 | 181205575 | 181205625 | E074 | 37990 |
| chr3 | 181206435 | 181206610 | E074 | 38850 |
| chr3 | 181214966 | 181215082 | E074 | 47381 |
| chr3 | 181215210 | 181215520 | E074 | 47625 |
| chr3 | 181135457 | 181135627 | E081 | 31958 |
| chr3 | 181135682 | 181135856 | E081 | 31729 |
| chr3 | 181136160 | 181136336 | E081 | 31249 |
| chr3 | 181203947 | 181204658 | E081 | 36362 |
| chr3 | 181206435 | 181206610 | E081 | 38850 |
| chr3 | 181135457 | 181135627 | E082 | 31958 |
| chr3 | 181136160 | 181136336 | E082 | 31249 |
| chr3 | 181203947 | 181204658 | E082 | 36362 |
| chr3 | 181214966 | 181215082 | E082 | 47381 |
| chr3 | 181215210 | 181215520 | E082 | 47625 |
Promoter annotation
| Chromosome | Start | End | Region | TSS distance |
|---|---|---|---|---|
| chr3 | 181175007 | 181175377 | E068 | 7422 |
| chr3 | 181175007 | 181175377 | E069 | 7422 |
| chr3 | 181175007 | 181175377 | E070 | 7422 |
| chr3 | 181175007 | 181175377 | E071 | 7422 |
| chr3 | 181175007 | 181175377 | E072 | 7422 |
| chr3 | 181175007 | 181175377 | E074 | 7422 |