Search results: The pahtway p2420 has 283 genes in the original annotation. Currently, there are 177 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
9886RHOBTB1-Rho related BTB domain containing 110q21.2CV:GWASdb
CV:PGCnp
5464PPA1HEL-S-66p | IOPPP | PP | PP1 | SID6-8061pyrophosphatase (inorganic) 110q22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
29760BLNKAGM4 | BASH | BLNK-S | LY57 | SLP-65 | SLP65 | bcaB-cell linker10q23.2-q23.33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
Expression
G2Cdb.humanPSD
G2Cdb.humanPSP
22849CPEB3-cytoplasmic polyadenylation element binding protein 310q23.32CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
953ENTPD1ATPDase | CD39 | NTPDase-1 | SPG64ectonucleoside triphosphate diphosphohydrolase 110q24CV:PGCnp
DMG:vanEijk_2014
57715SEMA4G-semaphorin 4G10q24.31CV:PGCnp
GO_Annotation
120071GYLTL1BLARGE2 | PP5656glycosyltransferase-like 1B11p11.2CV:PGCnp
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
10410IFITM31-8U | DSPA2b | IP15interferon induced transmembrane protein 311p15.5CV:PGCnp
DEG:Sanders_2013
Expression
PMID:cooccur
9415FADS2D6D | DES6 | FADSD6 | LLCDL2 | SLL0262 | TU13fatty acid desaturase 211q12.2CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
10413YAP1COB1 | YAP | YAP2 | YAP65 | YKIYes associated protein 111q13CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
Network
83707TRPT1-tRNA phosphotransferase 111q13.1CV:PGCnp
2526FUT4CD15 | ELFT | FCT3A | FUC-TIV | FUTIV | LeX | SSEA-1fucosyltransferase 411q21CV:GWASdb
CV:PGCnp
143689PIWIL4HIWI2 | MIWI2piwi-like RNA-mediated gene silencing 411q21CV:GWASdb
CV:PGCnp
25996REXO2CGI-114 | REX2 | RFN | SFNRNA exonuclease 211q23.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
9099USP2UBP41 | USP9ubiquitin specific peptidase 211q23.3CV:PGCnp
GSMA_I
PMID:cooccur
3703STT3AITM1 | STT3-A | TMCSTT3A, catalytic subunit of the oligosaccharyltransferase complex11q23.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
10205MPZL2EVA | EVA1myelin protein zero like 211q24CV:PGCnp
GSMA_I
6768ST14ARCI11 | HAI | MT-SP1 | MTSP1 | PRSS14 | SNC19 | TADG15 | TMPRSS14suppression of tumorigenicity 1411q24-q25CV:PGCnp
DMG:Wockner_2014
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
160518DENND5B-DENN domain containing 5B12p11.21CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
80824DUSP16MKP-7 | MKP7dual specificity phosphatase 1612p13CV:PGCnp
894CCND2KIAK0002 | MPPH3cyclin D212p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
50515CHST11C4ST | C4ST-1 | C4ST1 | HSA269537carbohydrate (chondroitin 4) sulfotransferase 1112qCV:GWASdb
CV:PGCnp
DMG:Wockner_2014
144165PRICKLE1EPM1B | RILPprickle planar cell polarity protein 112q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
784CACNB3CAB3 | CACNLB3calcium voltage-gated channel auxiliary subunit beta 312q13CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
65244SPATS2Nbla00526 | P59SCR | SCR59 | SPATA10spermatogenesis associated serine rich 212q13.12CV:PGCnp
DMG:Jaffe_2016
27165GLS2GA | GLS | LGA | hLGAglutaminase 212q13.3CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
10330CNPY2HP10390 | MSAP | TMEM4 | ZSIG9canopy FGF signaling regulator 212q15CV:PGCnp
22822PHLDA1DT1P1B11 | PHRIP | TDAG51pleckstrin homology like domain family A member 112q15CV:GWASdb
CV:PGCnp
PMID:cooccur
11163NUDT4DIPP2 | DIPP2alpha | DIPP2beta | HDCMB47Pnudix hydrolase 412q21CV:PGCnp
5074PAWRPAR4 | Par-4pro-apoptotic WT1 regulator12q21Association
CV:PGCnp
PMID:cooccur
10970CKAP4CLIMP-63 | ERGIC-63 | p63cytoskeleton-associated protein 412q23.3CV:PGCnp
DMG:vanEijk_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
6404SELPLGCD162 | CLA | PSGL-1 | PSGL1selectin P ligand12q24CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
7184HSP90B1ECGP | GP96 | GRP94 | HEL-S-125m | HEL35 | TRA1heat shock protein 90kDa beta family member 112q24.2-q24.3CV:PGCnp
DMG:Jaffe_2016
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
26960NBEABCL8B | LYST2neurobeachin13q13CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
22862FNDC3AFNDC3 | HUGO | bA203I16.1 | bA203I16.5fibronectin type III domain containing 3A13q14.2CV:PGCnp
DMG:vanEijk_2014
55647RAB20-RAB20, member RAS oncogene family13q34CV:GWASdb
CV:PGCnp
8660IRS2IRS-2insulin receptor substrate 213q34CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
64093SMOC1OASSPARC related modular calcium binding 114q24.2CV:PGCnp
DMG:Jaffe_2016
10972TMED10P24(DELTA) | S31I125 | S31III125 | TMP21 | Tmp-21-I | p23 | p24d1transmembrane p24 trafficking protein 1014q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
9578CDC42BPBMRCKBCDC42 binding protein kinase beta14q32.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7082TJP1ZO-1tight junction protein 115q13CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2923PDIA3ER60 | ERp57 | ERp60 | ERp61 | GRP57 | GRP58 | HEL-S-269 | HEL-S-93n | HsT17083 | P58 | PI-PLCprotein disulfide isomerase family A member 315q15CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
55075UACANUCLINGuveal autoantigen with coiled-coil domains and ankyrin repeats15q22-q24CV:PGCnp
DNM:Fromer_2014
CompositeSet
10391CORO2BCLIPINCcoronin 2B15q23CV:PGCnp
DMG:Jaffe_2016
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
56905C15orf39-chromosome 15 open reading frame 3915q24.2CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
Ascano FMRP targets
80765STARD5-StAR related lipid transfer domain containing 515q26CV:PGCnp
DMG:Nishioka_2013
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
4363ABCC1ABC29 | ABCC | GS-X | MRP | MRP1ATP binding cassette subfamily C member 116p13.1CNV:YES
CV:PGCnp
GSMA_IIE
PMID:cooccur
608TNFRSF17BCM | BCMA | CD269 | TNFRSF13Atumor necrosis factor receptor superfamily member 1716p13.1CV:PGCnp
23420NOMO1Nomo | PM5NODAL modulator 116p13.11CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
8912CACNA1HCACNA1HB | Cav3.2 | ECA6 | EIG6calcium voltage-gated channel subunit alpha1 H16p13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
527ATP6V0CATP6C | ATP6L | ATPL | VATL | VPPC | Vma3ATPase H+ transporting V0 subunit c16p13.3CV:PGCnp
DMG:Wockner_2014
ION BALANCE
4489MT1AMT1 | MT1S | MTCmetallothionein 1A16q13CV:PGCnp
DMG:Wockner_2014
4502MT2AMT2metallothionein 2A16q13CV:PGCnp
PMID:cooccur
8140SLC7A54F2LC | CD98 | D16S469E | E16 | LAT1 | MPE16 | hLAT1solute carrier family 7 member 516q24.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GO_Annotation
CELL METABOLISM
113235SLC46A1G21 | HCP1 | PCFTsolute carrier family 46 member 117q11.2CV:PGCnp
PMID:cooccur
4642MYO1DPPP1R108 | myr4myosin ID17q11.2CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
11072DUSP14MKP-L | MKP6dual specificity phosphatase 1417q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
140735DYNLL2DNCL1B | Dlc2 | RSPH22dynein light chain LC8-type 217q22CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
26115TANC2ROLSA | rolstetratricopeptide repeat, ankyrin repeat and coiled-coil containing 217q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
51321AMZ2-archaelysin family metallopeptidase 217q24.2CV:PGCnp
DMG:Jaffe_2016
55062WIPI1ATG18 | ATG18A | WIPI49WD repeat domain, phosphoinositide interacting 117q24.2CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
5034P4HBCLCRP1 | DSI | ERBA2L | GIT | P4Hbeta | PDI | PDIA1 | PHDB | PO4DB | PO4HB | PROHBprolyl 4-hydroxylase subunit beta17q25CV:PGCnp
DMG:Nishioka_2013
Network
RNA AND PROTEIN SYNTHESIS
6730SRP68-signal recognition particle 68kDa17q25.1CV:PGCnp
DMG:vanEijk_2014
5831PYCR1ARCL2B | ARCL3B | P5C | P5CR | PIG45 | PP222 | PRO3 | PYCRpyrroline-5-carboxylate reductase 117q25.3PMID:cooccurG2Cdb.humanPSD
G2Cdb.humanPSP
124565SLC38A10PP1744solute carrier family 38 member 1017q25.3CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
9663LPIN2-lipin 218p11.31CV:PGCnp
CV:PheWAS
CompositeSet
Darnell FMRP targets
114876OSBPL1AORP-1 | ORP1 | OSBPL1Boxysterol binding protein like 1A18q11.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
3998LMAN1ERGIC-53 | ERGIC53 | F5F8D | FMFD1 | MCFD1 | MR60 | gp58lectin, mannose binding 118q21.3-q22CV:GWASdb
CV:PGCnp
9244CRLF1CISS | CISS1 | CLF | CLF-1 | NR6 | zcytor5cytokine receptor-like factor 119p12CV:PGCnp
DMG:Wockner_2014
11018TMED1IL1RL1LG | Il1rl1l | Tp24 | p24g1transmembrane p24 trafficking protein 119p13.2CV:PGCnp
GO_Annotation
10683DLL3SCDO1delta-like 3 (Drosophila)19q13CV:PGCnp
DMG:Wockner_2014
5817PVRCD155 | HVED | NECL5 | Necl-5 | PVS | TAGE4poliovirus receptor19q13.2CV:PGCnp
PMID:cooccur
115290FBXO17FBG4 | FBX26 | FBXO26 | Fbx17F-box protein 1719q13.2CV:PGCnp
10945KDELR1ERD2 | ERD2.1 | HDEL | PM23KDEL endoplasmic reticulum protein retention receptor 119q13.3CV:PGCnp
54922RASIP1RAINRas interacting protein 119q13.33CV:PGCnp
54855FAM46C-family with sequence similarity 46 member C1p12CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
GSMA_IIA
204851HIPK1Myak | Nbak2homeodomain interacting protein kinase 11p13.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
CompositeSet
Darnell FMRP targets
64858DCLRE1BAPOLLO | SNM1B | SNMIBDNA cross-link repair 1B1p13.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
2135EXTL2EXTR2exostosin-like glycosyltransferase 21p21CV:PGCnp
84144SYDE2-synapse defective 1, Rho GTPase, homolog 2 (C. elegans)1p22.3CV:PGCnp
DMG:Jaffe_2016
257194NEGR1DMML2433 | IGLON4 | KILON | Ntraneuronal growth regulator 11p31.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
59269HIVEP3KBP-1 | KBP1 | KRC | SHN3 | Schnurri-3 | ZAS3 | ZNF40Chuman immunodeficiency virus type I enhancer binding protein 31p34CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
Expression
CompositeSet
Darnell FMRP targets
9672SDC3SDCN | SYND3syndecan 31p35.2CV:PGCnp
PMID:cooccur
Potential synaptic genes
51463GPR89BGPHR | GPR89 | GPR89C | SH120 | UNQ192G protein-coupled receptor 89B1q21.1CNV:YES
GSMA_I
GSMA_IIA
7371UCK2TSA903 | UK | UMPKuridine-cytidine kinase 21q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
7832BTG2PC3 | TIS21BTG family member 21q32CV:PGCnp
PMID:cooccur
54900LAX1LAXlymphocyte transmembrane adaptor 11q32.1CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
493ATP2B4ATP2B2 | MXRA1 | PMCA4 | PMCA4b | PMCA4xATPase plasma membrane Ca2+ transporting 41q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Awadalla_2010
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6238RRBP1ES/130 | ES130 | RRp | hESribosome binding protein 120p12CV:PGCnp
Expression
GSMA_I
RNA AND PROTEIN SYNTHESIS
Ascano FMRP targets
55741EDEM2C20orf31 | C20orf49 | bA4204.1ER degradation enhancer, mannosidase alpha-like 220q11.22CV:PGCnp
DNM:Xu_2012
CompositeSet
7052TGM2G-ALPHA-h | GNAH | HEL-S-45 | TG2 | TGCtransglutaminase 220q12CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
100ADA-adenosine deaminase20q13.12CV:PGCnp
Network
PMID:cooccur
1522CTSZCTSXcathepsin Z20q13.32CV:PGCnp
DMG:vanEijk_2014
23076RRP1BKIAA0179 | NNP1L | Nnp1 | PPP1R136 | RRP1ribosomal RNA processing 1B21q22.3CV:PGCnp
DNM:Xu_2012
CompositeSet
7494XBP1TREB-5 | TREB5 | XBP-1 | XBP2X-box binding protein 122q12.1|22q12Association
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
140606SELMSEPMselenoprotein M22q12.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
7263TSTRDSthiosulfate sulfurtransferase22q13.1CV:PGCnp
PMID:cooccur
79174CRELD2-cysteine rich with EGF like domains 222q13.33CV:PGCnp
84168ANTXR1ATR | GAPO | TEM8anthrax toxin receptor 12p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
90411MCFD2F5F8D | F5F8D2 | LMAN1IP | SDNSFmultiple coagulation factor deficiency 22p21CV:PGCnp
DMG:Nishioka_2013
388RHOBARH6 | ARHB | MST081 | MSTP081 | RHOH6ras homolog family member B2p24CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
6382SDC1CD138 | SDC | SYND1 | syndecansyndecan 12p24.1CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
Network
10130PDIA6ERP5 | P5 | TXNDC7protein disulfide isomerase family A member 62p25.1CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
129642MBOAT2LPCAT4 | OACT2membrane bound O-acyltransferase domain containing 22p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
253782CERS6CERS5 | LASS6ceramide synthase 62q24.3CV:PGCnp
GSMA_IIA
10787NCKAP1HEM2 | NAP1 | NAP125 | p125Nap1NCK associated protein 12q32CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7873MANFARMET | ARPmesencephalic astrocyte derived neurotrophic factor3p21.1CV:PGCnp
DMG:Jaffe_2016
28972SPCS1HSPC033 | SPC1 | SPC12 | YJR010C-Asignal peptidase complex subunit 13p21.1CV:PGCnp
LK:YES
55840EAF2BM040 | TRAITS | U19ELL associated factor 23q13.33CV:PGCnp
84561SLC12A8CCC9solute carrier family 12 member 83q21.2CV:PGCnp
3693ITGB5-integrin subunit beta 53q21.2CV:PGCnp
Network
6184RPN1OST1 | RBPH1ribophorin I3q21.3CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
29927SEC61A1HSEC61 | SEC61 | SEC61ASec61 translocon alpha 1 subunit3q21.3CV:PGCnp
DMG:Jaffe_2016
5291PIK3CBP110BETA | PI3K | PI3KBETA | PIK3C1phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta3q22.3CV:PGCnp
DNM:Girard_2011
Network
CompositeSet
8706B3GALNT1B3GALT3 | GLCT3 | GLOB | Gb4Cer | P | P1 | beta3Gal-T3 | galT3beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)3q25CV:PGCnp
DMG:Jaffe_2016
6498SKILSNO | SnoA | SnoI | SnoNSKI-like proto-oncogene3q26CV:PGCnp
Network
PMID:cooccur
64778FNDC3BFAD104 | PRO4979 | YVTM2421fibronectin type III domain containing 3B3q26.31CV:PGCnp
Expression
2557GABRA4-gamma-aminobutyric acid type A receptor alpha4 subunit4p12CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
54502RBM47NET18RNA binding motif protein 474p14CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
7466WFS1CTRCT41 | WFRS | WFS | WFSLwolframin ER transmembrane glycoprotein4p16.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
132884EVC2LBN | WADEvC ciliary complex subunit 24p16.2CV:PGCnp
DNM:Xu_2012
CompositeSet
5470PPEF2PPP7CBprotein phosphatase with EF-hand domain 24q21.1CV:PGCnp
PMID:cooccur
57619SHROOM3APXL3 | MSTP013 | SHRM | ShrmLshroom family member 34q21.1CV:PGCnp
CV:PheWAS
Ascano FMRP targets
81579PLA2G12AGXII | PLA2G12 | ROSSYphospholipase A2 group XIIA4q25CV:PGCnp
DMG:Wockner_2014
9871SEC24DCLCRP2SEC24 homolog D, COPII coat complex component4q26CV:PGCnp
DMG:Jaffe_2016
55212BBS7BBS2L1Bardet-Biedl syndrome 74q27CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
57600FNIP2FNIPL | MAPO1folliculin interacting protein 24q32.1CV:PGCnp
2823GPM6AGPM6 | M6Aglycoprotein M6A4q34CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
6507SLC1A3EA6 | EAAT1 | GLAST | GLAST1solute carrier family 1 member 35p13CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
10409BASP1CAP-23 | CAP23 | NAP-22 | NAP22brain abundant membrane attached signal protein 15p15.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7015TERTCMM9 | DKCA2 | DKCB4 | EST2 | PFBMFT1 | TCS1 | TP2 | TRT | hEST2 | hTRTtelomerase reverse transcriptase5p15.33CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
81037CLPTM1LCRR9CLPTM1-like5p15.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
22836RHOBTB3-Rho related BTB domain containing 35q15CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
PMID:cooccur
22936ELL2-elongation factor for RNA polymerase II 25q15CV:PGCnp
DMG:Wockner_2014
Expression
501ALDH7A1ATQ1 | EPD | PDEaldehyde dehydrogenase 7 family member A15q31CV:PGCnp
DMG:Jaffe_2016
GSMA_I
CompositeSet
340061TMEM173ERIS | MITA | MPYS | NET23 | SAVI | STING | hMITA | hSTINGtransmembrane protein 1735q31.2CV:PGCnp
DMG:Montano_2016
GSMA_I
9542NRG2DON1 | HRG2 | NTAKneuregulin 25q31.2Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GR_WM
GSMA_I
PMID:cooccur
NEUROTROPHIN SIGNALING
51520LARSHSPC192 | ILFS1 | LARS1 | LEURS | LEUS | LFIS | LRS | PIG44 | RNTLS | hr025Clleucyl-tRNA synthetase5q32CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
Ascano FMRP targets
1212CLTBLCBclathrin light chain B5q35CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
57222ERGIC1ERGIC-32 | ERGIC32 | NET24endoplasmic reticulum-golgi intermediate compartment 15q35.1CV:PGCnp
Expression
GSMA_IIA
1832DSPDCWHKTA | DPdesmoplakin6p24CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
10455ECI2ACBD2 | DRS-1 | DRS1 | HCA88 | PECI | dJ1013A10.3enoyl-CoA delta isomerase 26p24.3CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
3662IRF4LSIRF | MUM1 | NF-EM5 | SHEP8interferon regulatory factor 46p25.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
27145FILIP1FILIPfilamin A interacting protein 16q14.1CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
Expression
83699SH3BGRL2-SH3 domain binding glutamate rich protein like 26q14.1CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
22881ANKRD6-ankyrin repeat domain 66q15CV:PGCnp
DMG:Wockner_2014
51465UBE2J1CGI-76 | HSPC153 | HSPC205 | HSU93243 | NCUBE-1 | NCUBE1 | UBC6 | UBC6E | Ubc6pubiquitin conjugating enzyme E2 J16q15CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
639PRDM1BLIMP1 | PRDI-BF1PR domain 16q21CV:PGCnp
DMG:Jaffe_2016
5167ENPP1ARHR2 | COLED | M6S1 | NPP1 | NPPS | PC-1 | PCA1 | PDNP1ectonucleotide pyrophosphatase/phosphodiesterase 16q22-q23CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
51390AIG1AIG-1 | dJ95L4.1androgen-induced 16q24.2CV:PGCnp
DMG:Jaffe_2016
55033FKBP14EDSKMH | FKBP22 | IPBP12FK506 binding protein 147p14.3CV:PGCnp
27075TSPAN13NET-6 | NET6 | TM4SF13tetraspanin 137p21.1CV:PGCnp
DMG:Jaffe_2016
3382ICA1ICA69 | ICAp69islet cell autoantigen 17p22CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
11014KDELR2ELP-1 | ERD2.2KDEL endoplasmic reticulum protein retention receptor 27p22.1CV:PGCnp
DMG:Jaffe_2016
2990GUSBBG | MPS7glucuronidase beta7q21.11CV:PGCnp
PMID:cooccur
5445PON2-paraoxonase 27q21.3CV:GWASdb
CV:PGCnp
440ASNSASNSD | TS11asparagine synthetase (glutamine-hydrolyzing)7q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
93986FOXP2CAGH44 | SPCH1 | TNRC10forkhead box P27q31Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
55326AGPAT51AGPAT5 | LPAATE1-acylglycerol-3-phosphate O-acyltransferase 58p23.1CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
6591SNAI2SLUG | SLUGH1 | SNAIL2 | WS2Dsnail family zinc finger 28q11CV:PGCnp
PMID:cooccur
5862RAB2ALHX | RAB2RAB2A, member RAS oncogene family8q12.1CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
157807CLVS1CRALBPL | RLBP1L1clavesin 18q12.3CV:PGCnp
CV:PheWAS
2171FABP5E-FABP | EFABP | KFABP | PA-FABP | PAFABPfatty acid binding protein 58q21.13CV:GWASdb
CV:PGCnp
Expression
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
92140MTDH3D3 | AEG-1 | AEG1 | LYRIC | LYRIC/3D3metadherin8q22.1CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
55074OXR1Nbla00307 | TLDC3oxidation resistance 18q23CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
7038TGAITD3 | TGNthyroglobulin8q24CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
79139DERL1DER-1 | DER1derlin 18q24.13CV:PGCnp
DMG:Jaffe_2016
10221TRIB1C8FW | GIG-2 | GIG2 | SKIP1 | TRB-1 | TRB1tribbles pseudokinase 18q24.13CV:PGCnp
DMG:Jaffe_2016
83481EPPK1EPIPL | EPIPL1epiplakin 18q24.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
25853DCAF12CT102 | KIAA1892 | TCC52 | WDR40ADDB1 and CUL4 associated factor 129p13.3CV:PGCnp
DMG:Jaffe_2016
Expression
10497UNC13BMUNC13 | UNC13 | Unc13h2unc-13 homolog B (C. elegans)9p13.3CV:PGCnp
GO_Annotation
PMID:cooccur
CANABINOID
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
Ascano FMRP targets
256691MAMDC2-MAM domain containing 29q21.12CV:PGCnp
19ABCA1ABC-1 | ABC1 | CERP | HDLDT1 | TGDATP binding cassette subfamily A member 19q31.1CV:GWASdb
CV:PGCnp
DEG:Maycox_2009
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
5998RGS3C2PA | RGP3regulator of G-protein signaling 39q32CV:PGCnp
Network
PMID:cooccur
51566ARMCX3ALEX3 | GASP6 | dJ545K15.2armadillo repeat containing, X-linked 3Xq22.1CV:PGCnp