Gene Page: RBM7

Summary
GeneID  10179
Symbol  RBM7
Synonyms  FLJ11153
Description  RNA binding motif protein 7
See related  HGNC:9904|MIM:612413|Ensembl:ENSG00000076053|HPRD:11488|
Locus tag  -
Gene type  protein-coding
Map location  11q23.1-q23.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.006 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
TUSC30.910.93
CDC420.890.92
FUCA10.880.88
ANKRA20.870.91
B3GALNT10.870.88
PRKRA0.870.87
VDAC30.870.87
C1orf590.860.88
XPNPEP10.850.89
GAP430.840.82
Top 10 negatively co-expressed genes
AF347015.33-0.73-0.80
MT-CO2-0.72-0.78
AF347015.8-0.72-0.79
AF347015.27-0.71-0.78
AF347015.2-0.71-0.81
MT-CYB-0.71-0.78
AF347015.15-0.70-0.78
AF347015.26-0.70-0.81
AF347015.31-0.69-0.75
HLA-F-0.65-0.70
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0000166nucleotide bindingIEA-
GO:0003676nucleic acid bindingIEA-
GO:0003723RNA bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007126meiosisIEA-
 
Protein-protein InteractionsShown by network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
CCDC85BDIPAcoiled-coil domain containing 85BTwo-hybridBioGRID16189514 
HMG20AFLJ10739 | HMGX1high-mobility group 20ATwo-hybridBioGRID16189514 
HNRNPKCSBP | FLJ41122 | HNRPK | TUNPheterogeneous nuclear ribonucleoprotein KTwo-hybridBioGRID16189514 
KHDRBS3Etle | SALP | SLM-2 | SLM2 | T-STAR | TSTAR | etoileKH domain containing, RNA binding, signal transduction associated 3Two-hybridBioGRID16189514 
RBMXHNRPG | RBMXP1 | RBMXRT | RNMX | hnRNP-GRNA binding motif protein, X-linkedTwo-hybridBioGRID16189514 
SF3B2SAP145 | SF3B145 | SF3b1 | SF3b150splicing factor 3b, subunit 2, 145kDaReconstituted Complex
Two-hybrid
BioGRID12634307 
SFRS3SRp20splicing factor, arginine/serine-rich 3-HPRD,BioGRID12634307 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-125/351188194m8hsa-miR-125bbrainUCCCUGAGACCCUAACUUGUGA
hsa-miR-125abrainUCCCUGAGACCCUUUAACCUGUG
miR-141/200a6796861A,m8hsa-miR-141UAACACUGUCUGGUAAAGAUGG
hsa-miR-200aUAACACUGUCUGGUAACGAUGU
miR-3786326381Ahsa-miR-378CUCCUGACUCCAGGUCCUGUGU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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